HitPredict

Interactor 1: SR34A (A2RVS6)
Serine/arginine-rich splicing factor SR34A (At-SR34A) (At-SRp34A) (AtSR34A) (SER/ARG-rich protein 34A)
Gene: SR34A

Interactor 2: UBQ3 (Q1EC66)
Polyubiquitin 3 [Cleaved into: Ubiquitin]
Gene: UBQ3

Species: Arabidopsis thaliana

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.479

Property	Details
Experiments	23667124
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003729 - mRNA binding
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 300 At			1 306
+	At
		186860 SR34_ARATH (1-290): 2.89e-52: 175: 48.04		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	At
		186465 PABP4_ARATH (7-202): 6.36e-32: 126: 18.32		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	At
		983451 PABP5_ARATH (2-118): 4.6e-20: 92.1: 15.13		UBQ3_ARATH (1-306): 8.33e-132: 378: 100.00
+	Mm
		476715 TIA1_MOUSE (2-123): 1.7e-15: 77.9: 18.85		UBC_MOUSE (1-257): 3.33e-97: 303: 93.39
+	Rn
		1144257 PABP1_RAT (117-203): 1.24e-11: 67.1: 15.39		UBC_RAT (1-257): 1.1e-96: 304: 93.39
+	Hs
		475007 SRSF1_HUMAN (2-201): 4.41e-50: 167: 51.50		UBB_HUMAN (153-305): 2.64e-64: 204: 95.43
+	Mm
		476693 PABP1_MOUSE (117-203): 1.26e-11: 67.1: 15.39		UBC_MOUSE (1-257): 3.33e-97: 303: 93.39
+	Hs
		475665 SRSF1_HUMAN (2-201): 4.41e-50: 167: 51.50		UBC_HUMAN (1-153): 2.88e-52: 183: 95.43
+	Hs
		923975 SRSF6_HUMAN (8-190): 2.8e-50: 171: 38.80		RS27A_HUMAN (153-228): 2.61e-43: 147: 96.05
+	Hs
		923968 SRSF1_HUMAN (2-201): 4.41e-50: 167: 51.50		RS27A_HUMAN (153-228): 2.61e-43: 147: 96.05
+	Hs
		397933 SRSF1_HUMAN (2-201): 4.41e-50: 167: 51.50		ISG15_HUMAN (76-232): 2.64e-24: 98.1: 33.13
+	Hs
		475708 PABP4_HUMAN (119-203): 2.03e-12: 69.4: 17.98		UBC_HUMAN (1-153): 2.88e-52: 183: 95.43
+	Hs
		475288 PABP1_HUMAN (117-203): 1.16e-11: 67.1: 15.39		UBC_HUMAN (1-153): 2.88e-52: 183: 95.43
+	Hs
		1028667 SRSF5_HUMAN (5-190): 1.64e-51: 172: 36.02		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86
+	Hs
		1028932 SRSF6_HUMAN (8-190): 2.8e-50: 171: 38.80		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86
+	Hs
		1028556 SRSF9_HUMAN (2-229): 2.66e-49: 165: 44.11		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86
+	Hs
		397908 SRSF3_HUMAN (6-96): 1.91e-24: 98.4: 38.46		ISG15_HUMAN (76-232): 2.64e-24: 98.1: 33.13
+	Hs
		397745 PABP1_HUMAN (117-203): 1.16e-11: 67.1: 15.39		ISG15_HUMAN (76-232): 2.64e-24: 98.1: 33.13
+	Hs
		108890 H0YIB4_HUMAN (113-178): 2.48e-21: 88.4: 53.73		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86
+	Hs
		1031342 PABP4_HUMAN (119-203): 2.03e-12: 69.4: 17.98		OASL_HUMAN (1-81): 1.91e-10: 63.1: 30.86