HitPredict

Interactor 1: A2RVT9 (A2RVT9)
At5g38890 (Nucleic acid-binding, OB-fold-like protein)
Gene: At5g38890

Interactor 2: RRP41 (Q9SP08)
Exosome complex component RRP41 homolog (Ribosomal RNA-processing protein 41) (AtRRP41) (AtRrp41p)
Gene: RRP41

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

Property	Details
Experiments	25144737
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	ECR1_N~RNase_PH, ECR1_N~RNase_PH_C, EXOSC1~RNase_PH
Common GO terms	GO:0000176 - nuclear exosome (RNase complex) GO:0003723 - RNA binding GO:0005730 - nucleolus
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 191 At			1 241
+	Hs
		1342632 EXOS1_HUMAN (6-189): 4.29e-78: 233: 43.78		EXOS4_HUMAN (1-236): 1.32e-80: 243: 47.68
+	Dm
		1369103 Q9VKJ4_DROME (3-189): 5.79e-67: 205: 38.02		Q9VK19_DROME (1-232): 1.82e-74: 227: 40.60
+	Hs
		1285000 EXOS1_HUMAN (6-189): 4.29e-78: 233: 43.78		EXOS8_HUMAN (1-234): 3.62e-59: 189: 19.85
+	Hs
		1063786 EXOS1_HUMAN (6-189): 4.29e-78: 233: 43.78		EXOS7_HUMAN (5-233): 7.24e-50: 166: 15.04
+	Hs
		1343598 EXOS1_HUMAN (6-189): 4.29e-78: 233: 43.78		EXOS5_HUMAN (2-234): 4.76e-50: 165: 25.11
+	Sp
		194783 RRP4_SCHPO (5-153): 1.93e-54: 177: 24.16		RRP41_SCHPO (1-235): 7.33e-70: 215: 39.83
+	Dm
		1369105 Q9W1M9_DROME (5-153): 7.23e-49: 162: 22.82		Q9VK19_DROME (1-232): 1.82e-74: 227: 40.60
+	Hs
		1130069 EXOS1_HUMAN (6-189): 4.29e-78: 233: 43.78		EXOS6_HUMAN (3-228): 7.82e-46: 155: 28.75
+	Dm
		1369507 Q9VKJ4_DROME (3-189): 5.79e-67: 205: 38.02		Q9VW53_DROME (14-234): 5.92e-49: 165: 23.97
+	Sc
		754968 RRP4_YEAST (3-153): 6.22e-51: 169: 23.18		RRP41_YEAST (1-241): 6.82e-63: 198: 35.66
+	Dm
		1100456 Q9VKJ4_DROME (3-189): 5.79e-67: 205: 38.02		Q29QQ9_DROME (5-239): 2.13e-44: 152: 16.79
+	Sp
		252321 RRP4_SCHPO (5-153): 1.93e-54: 177: 24.16		RRP45_SCHPO (5-238): 2.84e-49: 165: 13.06
+	Hs
		1046284 EXOS2_HUMAN (5-153): 5.58e-49: 162: 23.49		EXOS7_HUMAN (5-233): 7.24e-50: 166: 15.04
+	Sp
		999811 RRP4_SCHPO (5-153): 1.93e-54: 177: 24.16		MTR3_SCHPO (14-236): 1.84e-44: 151: 26.20
+	Dm
		1374995 Q9W1M9_DROME (5-153): 7.23e-49: 162: 22.82		Q9VW53_DROME (14-234): 5.92e-49: 165: 23.97
+	Sp
		194809 RRP4_SCHPO (5-153): 1.93e-54: 177: 24.16		RRP46_SCHPO (25-234): 3.56e-42: 144: 23.50
+	Dm
		1366563 Q9W1M9_DROME (5-153): 7.23e-49: 162: 22.82		Q9VGZ2_DROME (17-230): 8.89e-47: 156: 23.26
+	Hs
		1046290 EXOS2_HUMAN (5-153): 5.58e-49: 162: 23.49		EXOS6_HUMAN (3-228): 7.82e-46: 155: 28.75
+	Dm
		1100458 Q9W1M9_DROME (5-153): 7.23e-49: 162: 22.82		Q29QQ9_DROME (5-239): 2.13e-44: 152: 16.79
+	Sc
		754976 RRP4_YEAST (3-153): 6.22e-51: 169: 23.18		RRP46_YEAST (22-232): 1.6e-27: 106: 22.22