HitPredict

Interactor 1: PRP4 (P20053)
U4/U6 small nuclear ribonucleoprotein PRP4 (Pre-mRNA-processing protein 4)
Gene: PRP4

Interactor 2: LSM8 (P47093)
U6 snRNA-associated Sm-like protein LSm8
Gene: LSM8

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.85 0.60 0.715

The method score is based on:

Property Details
Experiments 10900456, 10747033, 23560879, 37968396, 16429126
Identification Methods two hybrid, biochemical, affinity chromatography technology, tandem affinity purification
Interaction Type physical association, direct interaction, association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex
GO:0046540 - U4/U6 x U5 tri-snRNP complex
GO:0071001 - U4/U6 snRNP
Homologous interactions 15

Homologous interactions

Color coding for hit scores

1 465
Sc

1 109
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Service provided by Combinatics, Japan

Last updated: 15 Jul 2024