HitPredict

Interactor 1: XRN1 (P22147)
5'-3' exoribonuclease 1 (EC 3.1.13.-) (DNA strand transfer protein beta) (STP-beta) (KAR(-)-enhancing mutation protein) (Strand exchange protein 1) (p175)
Gene: XRN1

Interactor 2: DCP2 (P53550)
m7GpppN-mRNA hydrolase (EC 3.6.1.62) (Protein PSU1) (mRNA-decapping enzyme subunit 2)
Gene: DCP2

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.84 0.60 0.713

The method score is based on:

Property Details
Experiments 10900456, 16429126, 37968396, 35604319, 24569876
Identification Methods two hybrid, affinity chromatography technology, tandem affinity purification
Interaction Type physical association, direct interaction, association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000184 - nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0000932 - P-body
GO:0003682 - chromatin binding
GO:0003729 - mRNA binding
GO:0005634 - nucleus
and 2 others

more...
Homologous interactions 2

Homologous interactions

Color coding for hit scores

1 1528
Sc

1 970
+ Hs
+ Sp

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024