HitPredict

Interactor 1: XRN1 (P22147)
5'-3' exoribonuclease 1 (EC 3.1.13.-) (DNA strand transfer protein beta) (STP-beta) (KAR(-)-enhancing mutation protein) (Strand exchange protein 1) (p175)
Gene: XRN1

Interactor 2: LSM3 (P57743)
U6 snRNA-associated Sm-like protein LSm3 (SmX4 protein)
Gene: LSM3

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.91	0.60	0.741

Property	Details
Experiments	10747033, 30377154, 16554755, 19740761, 37968396, 14759368, 16429126
Identification Methods	biochemical, affinity chromatography technology, anti tag coimmunoprecipitation, tandem affinity purification
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000932 - P-body GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005737 - cytoplasm GO:0006364 - rRNA processing
Homologous interactions	4

Homologous interactions

Color coding for hit scores

	1 1528 Sc			1 89
+	Sc
		605080 XRN1_YEAST (1-1528): 0: 2262: 100.00		LSM1_YEAST (8-84): 1.39e-21: 84.5: 29.87
+	Sc
		605109 XRN1_YEAST (1-1528): 0: 2262: 100.00		LSM7_YEAST (2-83): 1.07e-20: 80.6: 30.23
+	Sc
		605056 XRN1_YEAST (1-1528): 0: 2262: 100.00		LSM5_YEAST (4-83): 2.79e-19: 76.4: 24.69
+	Hs
		912190 XRN2_HUMAN (1-702): 0: 917: 33.64		LSM3_HUMAN (1-81): 7.88e-25: 90.6: 40.23