Interactor 1: XRN1 (P22147)
5'-3' exoribonuclease 1 (EC 3.1.13.-) (DNA strand transfer protein beta) (STP-beta) (KAR(-)-enhancing mutation protein) (Strand exchange protein 1) (p175)
Gene: XRN1
Interactor 2: XRN2 (Q02792)
5'-3' exoribonuclease 2 (EC 3.1.13.-) (Ribonucleic acid-trafficking protein 1) (p116)
Gene: RAT1
Species: Saccharomyces cerevisiae S288C
Source: biogrid
Category: High-throughput
Confidence: High
| Method score | Annotation score | Interaction score |
|---|---|---|
| 0.38 | 1.00 | 0.618 |
The method score is based on:
| Property | Details |
|---|---|
| Experiments | 37263996 |
| Identification Methods | affinity chromatography technology |
| Interaction Type | physical association |
The annotation score is based on:
| Property | Details |
|---|---|
| Interacting Pfam domains | SH3_12~XRN_N, XRN1_D1~XRN_M, XRN1_D1~XRN_N, XRN1_D2_D3~XRN_M, XRN_M~XRN_M, XRN_M~XRN_N, XRN_N~XRN_N |
| Common GO terms | GO:0000956 - nuclear-transcribed mRNA catabolic process GO:0003723 - RNA binding GO:0003729 - mRNA binding GO:0004534 - 5'-3' RNA exonuclease activity GO:0005634 - nucleus and 2 others more... |
| Homologous interactions | 3 |
Homologous interactions
Color coding for hit scores 
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Service provided by Combinatics, Japan
Last updated: 15 Jul 2024
