HitPredict

Interactor 1: AGL16 (A2RVQ5)
Agamous-like MADS-box protein AGL16
Gene: AGL16

Interactor 2: SEP3 (O22456)
Developmental protein SEPALLATA 3 (Agamous-like MADS-box protein AGL9)
Gene: SEP3

Species: Arabidopsis thaliana

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.43	1.00	0.656

Property	Details
Experiments	15805477
Identification Methods	two hybrid
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	K-box~K-box, SRF-TF~SRF-TF
Common GO terms	GO:0000977 - RNA polymerase II transcription regulatory region sequence-specific DNA binding GO:0003700 - DNA-binding transcription factor activity GO:0005634 - nucleus GO:0009908 - flower development GO:0045944 - positive regulation of transcription by RNA polymerase II
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 240 At			1 251
+	At
		198843 AGL6_ARATH (1-234): 1.33e-77: 236: 35.98		SEP3_ARATH (1-251): 1e-89: 267: 100.00
+	Os
		1070463 MADS6_ORYSJ (1-222): 1.86e-78: 238: 36.94		MADS7_ORYSJ (1-245): 6.81e-77: 234: 57.60
+	At
		712072 AGL6_ARATH (1-234): 1.33e-77: 236: 35.98		Q5XXN7_ARATH (1-245): 1.25e-77: 236: 60.71
+	At
		60929 AGL16_ARATH (1-240): 1.18e-75: 230: 100.00		SEP2_ARATH (1-245): 3.15e-78: 238: 59.68
+	At
		60938 AGL16_ARATH (1-240): 1.18e-75: 230: 100.00		Q5XXL4_ARATH (1-245): 3.15e-78: 238: 59.68
+	Os
		1232164 MADS6_ORYSJ (1-222): 1.86e-78: 238: 36.94		MADS8_ORYSJ (1-245): 1.37e-73: 226: 59.52
+	At
		711994 AGL6_ARATH (1-234): 1.33e-77: 236: 35.98		SEP1_ARATH (1-245): 8.3e-73: 224: 60.24
+	Os
		1232163 MADS6_ORYSJ (1-222): 1.86e-78: 238: 36.94		MAD17_ORYSJ (1-234): 1.88e-70: 218: 51.71
+	Os
		1083945 MADS6_ORYSJ (1-222): 1.86e-78: 238: 36.94		MADS1_ORYSJ (1-223): 3.85e-70: 217: 56.83
+	At
		60928 AGL16_ARATH (1-240): 1.18e-75: 230: 100.00		SEP1_ARATH (1-245): 8.3e-73: 224: 60.24
+	At
		60931 AGL16_ARATH (1-240): 1.18e-75: 230: 100.00		AGL6_ARATH (1-245): 1.87e-72: 223: 45.91
+	Os
		1179745 MADS6_ORYSJ (1-222): 1.86e-78: 238: 36.94		MAD13_ORYSJ (1-185): 1.62e-68: 214: 44.87
+	Os
		1068938 MADS6_ORYSJ (1-222): 1.86e-78: 238: 36.94		MAD18_ORYSJ (1-250): 4.41e-68: 212: 40.32
+	Os
		1068952 MADS6_ORYSJ (1-222): 1.86e-78: 238: 36.94		MADS5_ORYSJ (1-232): 5.6e-67: 208: 52.59
+	At
		60927 AGL16_ARATH (1-240): 1.18e-75: 230: 100.00		AGL1_ARATH (1-227): 6.58e-70: 216: 40.52
+	At
		712071 AGL6_ARATH (1-234): 1.33e-77: 236: 35.98		AGL8_ARATH (1-250): 3.88e-67: 209: 39.37
+	Os
		1083937 MADS6_ORYSJ (1-222): 1.86e-78: 238: 36.94		MAD14_ORYSJ (1-249): 6.11e-65: 204: 40.56
+	Os
		504790 MADS6_ORYSJ (1-222): 1.86e-78: 238: 36.94		MAD56_ORYSJ (1-234): 4.85e-65: 203: 37.02
+	At
		712067 AGL6_ARATH (1-234): 1.33e-77: 236: 35.98		AP1_ARATH (1-234): 3.92e-63: 199: 41.18
+	At
		60932 AGL16_ARATH (1-240): 1.18e-75: 230: 100.00		AP1_ARATH (1-234): 3.92e-63: 199: 41.18