HitPredict

Interactor 1: SPT6 (P23615)
Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
Gene: SPT6

Interactor 2: SPT6 (P23615)
Transcription elongation factor SPT6 (Chromatin elongation factor SPT6)
Gene: SPT6

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.56 1.00 0.755

The method score is based on:

Property Details
Experiments 35640611, 21179020
Identification Methods pull down, tandem affinity purification
Interaction Type direct interaction, association

The annotation score is based on:

Property Details
Interacting Pfam domains HHH_7~HTH_44, HHH_7~YqgF, SH2_2~SH2_2
Common GO terms GO:0000122 - negative regulation of transcription by RNA polymerase II
GO:0000433 - carbon catabolite repression of transcription from RNA polymerase II promoter by glucose
GO:0000791 - euchromatin
GO:0001073 - transcription antitermination factor activity, DNA binding
GO:0001178 - regulation of transcriptional start site selection at RNA polymerase II promoter
and 18 others

more...
Homologous interactions 9

Homologous interactions

Color coding for hit scores

1 1451
Sc

1 1451
+ Zm
+ Ec
+ Ec
+ Sc
+ Pf
+ Pf
+ Dd
+ Ec
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024