HitPredict

Interactor 1: RNA15 (P25299)
mRNA 3'-end-processing protein RNA15
Gene: RNA15

Interactor 2: HRP1 (Q99383)
Nuclear polyadenylated RNA-binding protein 4 (Cleavage factor IB) (CFIB) (Heterogeneous nuclear ribonucleoprotein 1)
Gene: HRP1

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.70	1.00	0.837

Property	Details
Experiments	11689695, 9334319, 20600122
Identification Methods	two hybrid, pull down
Interaction Type	physical association, direct interaction

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0003729 - mRNA binding GO:0005849 - mRNA cleavage factor complex GO:0006397 - mRNA processing
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 296 Sc			1 534
+	Sc
		376993 PABP_YEAST (6-207): 2.72e-29: 118: 11.33		HRP1_YEAST (1-534): 5.54e-86: 277: 100.00
+	Hs
		1054535 RBM39_HUMAN (2-101): 5.57e-35: 134: 32.35		ROAA_HUMAN (91-361): 1.44e-73: 238: 30.94
+	Hs
		852057 RBM39_HUMAN (2-101): 5.57e-35: 134: 32.35		ROA3_HUMAN (152-327): 7.1e-69: 228: 38.80
+	Sc
		376645 RNA15_YEAST (1-296): 2.1e-51: 172: 100.00		PABP_YEAST (33-514): 1.08e-49: 182: 13.94
+	Hs
		201670 RBM39_HUMAN (2-101): 5.57e-35: 134: 32.35		MSI1H_HUMAN (143-474): 2.1e-59: 202: 23.93
+	Hs
		1054499 RBM39_HUMAN (2-101): 5.57e-35: 134: 32.35		MSI2H_HUMAN (140-474): 1.17e-55: 191: 25.29
+	Hs
		1048061 RBM39_HUMAN (2-101): 5.57e-35: 134: 32.35		HNRPD_HUMAN (64-365): 1.46e-52: 184: 31.35
+	Sc
		376886 NOP13_YEAST (10-167): 1.25e-36: 136: 20.63		PABP_YEAST (33-514): 1.08e-49: 182: 13.94
+	Hs
		680450 TIA1_HUMAN (13-238): 1.16e-31: 122: 14.72		HNRPD_HUMAN (64-365): 1.46e-52: 184: 31.35
+	Hs
		963520 TIAR_HUMAN (11-214): 2.22e-30: 119: 15.79		HNRPD_HUMAN (64-365): 1.46e-52: 184: 31.35
+	Sc
		376562 PABP_YEAST (6-207): 2.72e-29: 118: 11.33		PABP_YEAST (33-514): 1.08e-49: 182: 13.94
+	Hs
		609861 RBM39_HUMAN (2-101): 5.57e-35: 134: 32.35		ROA2_HUMAN (139-242): 1.7e-23: 103: 31.43
+	Hs
		516358 PABP1_HUMAN (19-191): 1.11e-28: 117: 13.56		ROA2_HUMAN (139-242): 1.7e-23: 103: 31.43
+	Hs
		1031328 RBM39_HUMAN (2-101): 5.57e-35: 134: 32.35		PABP4_HUMAN (233-328): 1.27e-15: 81.9: 20.62
+	Hs
		516518 RBM39_HUMAN (2-101): 5.57e-35: 134: 32.35		PABP1_HUMAN (233-328): 5.67e-15: 80: 22.68
+	Hs
		474021 PABP4_HUMAN (19-187): 6.16e-31: 123: 15.88		PAB4L_HUMAN (234-395): 2.3e-16: 82.7: 14.72
+	Hs
		516495 PABP4_HUMAN (19-187): 6.16e-31: 123: 15.88		PABP1_HUMAN (233-328): 5.67e-15: 80: 22.68
+	Mm
		665745 TIA1_MOUSE (13-238): 5.56e-32: 123: 14.72		PABP1_MOUSE (233-328): 7e-15: 79.6: 22.68
+	Hs
		516471 TIAR_HUMAN (11-214): 2.22e-30: 119: 15.79		PABP1_HUMAN (233-328): 5.67e-15: 80: 22.68
+	Hs
		516339 PABP1_HUMAN (19-191): 1.11e-28: 117: 13.56		PABP1_HUMAN (233-328): 5.67e-15: 80: 22.68