HitPredict

Interactor 1: PAT1 (P25644)
Deadenylation-dependent mRNA-decapping factor PAT1 (DNA topoisomerase 2-associated protein PAT1) (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
Gene: PAT1

Interactor 2: PAT1 (P25644)
Deadenylation-dependent mRNA-decapping factor PAT1 (DNA topoisomerase 2-associated protein PAT1) (Decapping activator and translational repressor PAT1) (Topoisomerase II-associated protein PAT1) (mRNA turnover protein 1)
Gene: PAT1

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.58	1.00	0.768

The method score is based on:

Property	Details
Experiments	20832728, 14759368
Identification Methods	pull down, affinity chromatography technology
Interaction Type	direct interaction, physical association

The annotation score is based on:

Property	Details
Interacting Pfam domains	PAT1~PAT1
Common GO terms	GO:0000290 - deadenylation-dependent decapping of nuclear-transcribed mRNA GO:0000776 - kinetochore GO:0000932 - P-body GO:0001731 - formation of translation preinitiation complex GO:0003682 - chromatin binding and 13 others more... GO:0003723 - RNA binding GO:0003729 - mRNA binding GO:0005634 - nucleus GO:0005737 - cytoplasm GO:0006397 - mRNA processing GO:0006446 - regulation of translational initiation GO:0007049 - cell cycle GO:0010494 - cytoplasmic stress granule GO:0022627 - cytosolic small ribosomal subunit GO:0033962 - P-body assembly GO:0045947 - negative regulation of translational initiation GO:0051301 - cell division GO:1990726 - Lsm1-7-Pat1 complex
Homologous interactions	5

Homologous interactions

Color coding for hit scores

	1	796
Sc

1	796

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024