HitPredict

Interactor 1: PABP1 (P29341)
Polyadenylate-binding protein 1 (PABP-1) (Poly(A)-binding protein 1)
Gene: Pabpc1

Interactor 2: RBM38 (Q62176)
RNA-binding protein 38 (RNA-binding motif protein 38) (RNA-binding region-containing protein 1) (ssDNA-binding protein SEB4)
Gene: RBM38

Species: Mus musculus

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.621

Property	Details
Experiments	34133714
Identification Methods	two hybrid
Interaction Type	direct interaction

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0003729 - mRNA binding GO:0003730 - mRNA 3'-UTR binding GO:0005634 - nucleus GO:0005829 - cytosol GO:0006397 - mRNA processing and 1 others more... GO:0008380 - RNA splicing
Homologous interactions	19

Homologous interactions

Color coding for hit scores

	1 636 Mm			1 237
+	Hs
		516358 PABP1_HUMAN (1-636): 0: 596: 99.69		ROA2_HUMAN (11-119): 1.3e-36: 133: 34.86
+	Hs
		516424 PABP1_HUMAN (1-636): 0: 596: 99.69		ROA3_HUMAN (11-107): 3.75e-34: 127: 36.08
+	Hs
		453107 PABP1_HUMAN (1-636): 0: 596: 99.69		ROA1_HUMAN (11-110): 8.75e-26: 105: 33.00
+	Hs
		516511 PABP1_HUMAN (1-636): 0: 596: 99.69		HNRPD_HUMAN (18-206): 1.43e-23: 98.6: 17.46
+	Hs
		516495 PABP1_HUMAN (1-636): 0: 596: 99.69		PABP4_HUMAN (20-122): 2.36e-20: 91.3: 24.04
+	Hs
		516663 PABP1_HUMAN (1-636): 0: 596: 99.69		ROAA_HUMAN (15-107): 8.22e-20: 88.3: 28.72
+	Hs
		516339 PABP1_HUMAN (1-636): 0: 596: 99.69		PABP1_HUMAN (20-128): 2.25e-18: 85.5: 24.55
+	Hs
		453331 PABP4_HUMAN (1-635): 0: 550: 74.54		ROA1_HUMAN (11-110): 8.75e-26: 105: 33.00
+	Hs
		516689 PABP3_HUMAN (1-636): 0: 559: 91.37		PABP1_HUMAN (20-128): 2.25e-18: 85.5: 24.55
+	Hs
		852134 PABP5_HUMAN (87-397): 1.59e-57: 200: 31.53		ROA3_HUMAN (11-107): 3.75e-34: 127: 36.08
+	Zm
		8143 A0A1D6ELH4_MAIZE (2-448): 2.42e-68: 236: 25.54		A0A1D6ELH4_MAIZE (4-119): 1.93e-16: 79.7: 26.50
+	Hs
		474021 PAB4L_HUMAN (95-395): 2.43e-64: 218: 34.21		PABP4_HUMAN (20-122): 2.36e-20: 91.3: 24.04
+	Hs
		453526 PABP5_HUMAN (87-397): 1.59e-57: 200: 31.53		ROA1_HUMAN (11-110): 8.75e-26: 105: 33.00
+	Hs
		1119141 PABP5_HUMAN (87-397): 1.59e-57: 200: 31.53		PAP1L_HUMAN (20-121): 4.88e-19: 87.4: 24.27
+	Hs
		516635 PABP5_HUMAN (87-397): 1.59e-57: 200: 31.53		PABP1_HUMAN (20-128): 2.25e-18: 85.5: 24.55
+	Hs
		680450 TIA1_HUMAN (4-172): 3.45e-42: 158: 28.57		HNRPD_HUMAN (18-206): 1.43e-23: 98.6: 17.46
+	Mm
		665745 TIA1_MOUSE (4-188): 7.8e-36: 141: 25.85		PABP1_MOUSE (20-128): 2.52e-18: 85.1: 24.55
+	Sc
		376562 PABP_YEAST (184-377): 5.46e-33: 135: 25.51		PABP_YEAST (11-119): 8.81e-19: 86.7: 21.82
+	Hs
		453138 NUCL_HUMAN (3-92): 4.18e-20: 96.8: 32.22		ROA1_HUMAN (11-110): 8.75e-26: 105: 33.00