HitPredict

Interactor 1: RENT1 (P30771)
ATP-dependent helicase NAM7 (EC 3.6.4.12) (EC 3.6.4.13) (Nonsense-mediated mRNA decay protein 1) (Nuclear accommodation of mitochondria 7 protein) (Up-frameshift suppressor 1)
Gene: NAM7

Interactor 2: LSM1 (P47017)
Sm-like protein LSm1 (SPB8 protein)
Gene: LSM1

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.73	0.60	0.662

Property	Details
Experiments	11805826, 30275269, 16429126
Identification Methods	tandem affinity purification, affinity chromatography technology
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003729 - mRNA binding GO:0005737 - cytoplasm
Homologous interactions	8

Homologous interactions

Color coding for hit scores

	1 971 Sc			1 172
+	Sc
		675764 RENT1_YEAST (1-971): 0: 1317: 100.00		LSM7_YEAST (8-119): 4.92e-26: 97.5: 27.97
+	Sc
		675766 RENT1_YEAST (1-971): 0: 1317: 100.00		LSM3_YEAST (46-120): 1.16e-19: 80.2: 29.87
+	Hs
		321423 RENT1_HUMAN (37-902): 0: 1142: 53.69		LSM8_HUMAN (43-135): 8.57e-29: 104: 32.98
+	Hs
		927992 RENT1_HUMAN (37-902): 0: 1142: 53.69		RSMN_HUMAN (42-118): 8.26e-24: 95.1: 28.24
+	Hs
		539084 RENT1_HUMAN (37-902): 0: 1142: 53.69		RSMB_HUMAN (42-118): 3e-23: 93.6: 28.24
+	Sc
		811660 SEN1_YEAST (222-879): 1.13e-156: 512: 23.04		LSM8_YEAST (43-150): 4.47e-21: 84.7: 18.52
+	Sc
		766938 SEN1_YEAST (222-879): 1.13e-156: 512: 23.04		RSMB_YEAST (35-153): 5.78e-20: 84: 21.32
+	Hs
		321377 SMBP2_HUMAN (292-893): 9.51e-155: 484: 25.84		LSM8_HUMAN (43-135): 8.57e-29: 104: 32.98