HitPredict

Interactor 1: RPD3 (P32561)
Histone deacetylase RPD3 (EC 3.5.1.98) (Transcriptional regulatory protein RPD3)
Gene: RPD3

Interactor 2: RCO1 (Q04779)
Transcriptional regulatory protein RCO1
Gene: RCO1

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.96 0.60 0.759

The method score is based on:

Property Details
Experiments 11805826, 16554755, 16429126, 16286008, 16286007, 26747610, 37968396, 38598631, 22177115, 23878396, 17101441, 21179020
Identification Methods tandem affinity purification, affinity chromatography technology, pull down
Interaction Type physical association, direct interaction, association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000118 - histone deacetylase complex
GO:0000122 - negative regulation of transcription by RNA polymerase II
GO:0005634 - nucleus
GO:0006334 - nucleosome assembly
GO:0006357 - regulation of transcription by RNA polymerase II
and 4 others

more...
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 433
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Service provided by Combinatics, Japan

Last updated: 15 Jul 2024