HitPredict

Interactor 1: PUB1 (P32588)
Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 (ARS consensus-binding protein ACBP-60) (Poly uridylate-binding protein) (Poly(U)-binding protein)
Gene: PUB1

Interactor 2: SMD3 (P43321)
Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
Gene: SMD3

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.68	0.60	0.643

Property	Details
Experiments	11805826, 32857852, 16429126
Identification Methods	tandem affinity purification, affinity chromatography technology
Interaction Type	physical association, association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003729 - mRNA binding GO:0005634 - nucleus GO:0005737 - cytoplasm
Homologous interactions	8

Homologous interactions

Color coding for hit scores

	1 453 Sc			1 101
+	Sc
		694021 PUB1_YEAST (1-441): 7.49e-91: 284: 100.00		LSM2_YEAST (9-90): 3.45e-24: 89.6: 17.86
+	Sc
		694063 PUB1_YEAST (1-441): 7.49e-91: 284: 100.00		LSM4_YEAST (6-101): 5.39e-23: 88.8: 23.36
+	Sc
		376759 PABP_YEAST (2-344): 4.03e-48: 175: 18.66		LSM2_YEAST (9-90): 3.45e-24: 89.6: 17.86
+	Sc
		376804 PABP_YEAST (2-344): 4.03e-48: 175: 18.66		LSM4_YEAST (6-101): 5.39e-23: 88.8: 23.36
+	Sc
		795405 NAM8_YEAST (76-310): 5.65e-22: 100: 16.11		SMD3_YEAST (1-101): 1.39e-34: 115: 100.00
+	Dm
		218382 Q9W424_DROME (74-243): 3.27e-20: 93.2: 31.40		SMD3_DROME (3-100): 7e-36: 120: 41.84
+	Hs
		911843 SF3B4_HUMAN (74-243): 3.99e-20: 94: 31.40		RUXF_HUMAN (7-73): 2.92e-27: 96.9: 26.87
+	Hs
		911850 ELAV1_HUMAN (345-419): 2.87e-15: 78.4: 20.99		RUXF_HUMAN (7-73): 2.92e-27: 96.9: 26.87