HitPredict

Interactor 1: PUB1 (P32588)
Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 (ARS consensus-binding protein ACBP-60) (Poly uridylate-binding protein) (Poly(U)-binding protein)
Gene: PUB1

Interactor 2: SLH1 (P53327)
RQC trigger complex helicase SLH1 (EC 3.6.4.13) (Antiviral helicase SLH1) (SKI2-like helicase 1)
Gene: SLH1

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.479

Property	Details
Experiments	32857852
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003729 - mRNA binding GO:0005737 - cytoplasm GO:0010494 - cytoplasmic stress granule
Homologous interactions	17

Homologous interactions

Color coding for hit scores

	1 453 Sc			1 1967
+	Hs
		516589 PABP1_HUMAN (6-167): 3.88e-17: 86.1: 15.85		ASCC3_HUMAN (3-1965): 0: 1331: 39.83
+	Sp
		678721 PABP_SCHPO (30-357): 1.46e-47: 175: 19.01		BRR2_SCHPO (40-1964): 0: 1199: 32.74
+	Sc
		693959 PUB1_YEAST (1-441): 7.49e-91: 284: 100.00		BRR2_YEAST (42-1965): 0: 1088: 29.43
+	Sc
		376698 PABP_YEAST (2-344): 4.03e-48: 175: 18.66		BRR2_YEAST (42-1965): 0: 1088: 29.43
+	Sc
		697242 NAM8_YEAST (76-310): 5.65e-22: 100: 16.11		BRR2_YEAST (42-1965): 0: 1088: 29.43
+	Sc
		376837 PABP_YEAST (2-344): 4.03e-48: 175: 18.66		MTR4_YEAST (1084-1603): 1.87e-97: 343: 19.79
+	Sp
		143097 PABP_SCHPO (30-357): 1.46e-47: 175: 19.01		YE02_SCHPO (1069-1551): 1.67e-89: 318: 21.44
+	Mm
		857323 TIA1_MOUSE (75-250): 2.53e-27: 114: 38.10		DDX17_MOUSE (1055-1548): 3.24e-103: 348: 12.65
+	Mm
		857351 TIA1_MOUSE (75-250): 2.53e-27: 114: 38.10		Q8BTS0_MOUSE (1053-1592): 1.56e-103: 348: 12.34
+	Mm
		936480 TIAR_MOUSE (75-241): 3.38e-27: 114: 38.38		DDX5_MOUSE (1053-1592): 1.36e-103: 348: 12.34
+	Hs
		1073596 SF3B4_HUMAN (74-243): 3.99e-20: 94: 31.40		DDX42_HUMAN (1037-1592): 4.36e-104: 359: 12.43
+	Hs
		1073611 SF3B4_HUMAN (74-243): 3.99e-20: 94: 31.40		DDX17_HUMAN (1055-1548): 2.55e-102: 348: 12.65
+	Hs
		1077436 ELAV1_HUMAN (345-419): 2.87e-15: 78.4: 20.99		DDX17_HUMAN (1055-1548): 2.55e-102: 348: 12.65
+	Hs
		571469 ELAV1_HUMAN (345-419): 2.87e-15: 78.4: 20.99		DDX5_HUMAN (1053-1592): 9.6e-104: 348: 12.34
+	Hs
		134018 PABP4_HUMAN (6-167): 2.17e-18: 90: 15.34		DDX3X_HUMAN (1068-1549): 2.58e-89: 308: 12.60
+	Sp
		144369 SAP49_SCHPO (74-242): 3.78e-18: 87: 31.77		PRP11_SCHPO (1056-1604): 4.47e-87: 311: 12.63
+	Hs
		133858 PABP1_HUMAN (6-167): 3.88e-17: 86.1: 15.85		DDX3X_HUMAN (1068-1549): 2.58e-89: 308: 12.60