HitPredict

Interactor 1: RUXF (P34659)
Probable small nuclear ribonucleoprotein F (snRNP-F) (Sm protein F) (Sm-F) (SmF)
Gene: snr-5

Interactor 2: RUXE (Q9XTU6)
Probable small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E) (Sm-E) (SmE)
Gene: snr-6

Species: Caenorhabditis elegans

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.34	1.00	0.590

Property	Details
Experiments	11731503
Identification Methods	two hybrid
Interaction Type	physical association

Property	Details
Interacting Pfam domains	LSM~LSM
Common GO terms	GO:0000387 - spliceosomal snRNP assembly GO:0003723 - RNA binding GO:0005685 - U1 snRNP GO:0005829 - cytosol GO:0034715 - pICln-Sm protein complex
Homologous interactions	15

Homologous interactions

Color coding for hit scores

	1 85 Ce			1 90
+	Hs
		911779 LSM4_HUMAN (7-82): 4.6e-34: 114: 25.97		RUXE_HUMAN (4-85): 1.31e-41: 132: 67.07
+	Dm
		1097029 RUXF_DROME (1-84): 2.03e-34: 114: 65.48		RUXE_DROME (3-85): 4.5e-41: 131: 66.27
+	At
		1227147 RUXF_ARATH (3-82): 5.51e-33: 110: 75.00		Q8LAK5_ARATH (1-86): 1.43e-41: 132: 59.30
+	At
		1352881 RUXF_ARATH (3-82): 5.51e-33: 110: 75.00		Q9ZV45_ARATH (1-85): 9.25e-41: 130: 57.65
+	Hs
		911605 RUXF_HUMAN (5-77): 1.12e-31: 107: 73.97		RUXE_HUMAN (4-85): 1.31e-41: 132: 67.07
+	Hs
		911608 LSM6_HUMAN (8-78): 5.07e-30: 103: 42.25		RUXE_HUMAN (4-85): 1.31e-41: 132: 67.07
+	At
		1227145 LSM6A_ARATH (8-85): 1.25e-29: 102: 39.74		Q8LAK5_ARATH (1-86): 1.43e-41: 132: 59.30
+	At
		1340906 LSM6A_ARATH (8-85): 1.25e-29: 102: 39.74		Q9ZV45_ARATH (1-85): 9.25e-41: 130: 57.65
+	Sc
		873680 RUXF_YEAST (1-79): 4.56e-28: 98.4: 56.25		RUXE_YEAST (1-86): 1.26e-37: 122: 49.46
+	Hs
		911611 SMD3_HUMAN (1-78): 1.65e-23: 88: 23.08		RUXE_HUMAN (4-85): 1.31e-41: 132: 67.07
+	Dm
		218372 SMD3_DROME (1-78): 1.21e-21: 83.8: 23.08		RUXE_DROME (3-85): 4.5e-41: 131: 66.27
+	Hs
		911773 LSM2_HUMAN (11-83): 1.36e-21: 82.3: 31.58		RUXE_HUMAN (4-85): 1.31e-41: 132: 67.07
+	Sc
		795435 SMD3_YEAST (9-78): 1.84e-23: 87.3: 25.71		RUXE_YEAST (1-86): 1.26e-37: 122: 49.46
+	Sc
		746366 LSM2_YEAST (7-84): 1.38e-19: 77.2: 30.86		RUXE_YEAST (1-86): 1.26e-37: 122: 49.46
+	Sc
		884839 LSM3_YEAST (8-84): 4.87e-10: 52.7: 23.81		RUXE_YEAST (1-86): 1.26e-37: 122: 49.46