HitPredict

Interactor 1: RSC30 (P38781)
Chromatin structure-remodeling complex protein RSC30 (Remodel the structure of chromatin complex subunit 30)
Gene: RSC30

Interactor 2: RSC3 (Q06639)
Chromatin structure-remodeling complex protein RSC3 (Remodel the structure of chromatin complex subunit 3)
Gene: RSC3

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.85	1.00	0.925

The method score is based on:

Property	Details
Experiments	11336698, 36509793, 16429126, 16204215, 37968396
Identification Methods	coimmunoprecipitation, affinity chromatography technology, biochemical, anti tag coimmunoprecipitation, tandem affinity purification
Interaction Type	physical association, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	Zn_clus~Zn_clus
Common GO terms	GO:0000785 - chromatin GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific GO:0005634 - nucleus GO:0006337 - nucleosome disassembly and 6 others more... GO:0006338 - chromatin remodeling GO:0006355 - regulation of DNA-templated transcription GO:0006368 - transcription elongation by RNA polymerase II GO:0008270 - zinc ion binding GO:0016586 - RSC-type complex GO:0045944 - positive regulation of transcription by RNA polymerase II
Homologous interactions	1

Homologous interactions

Color coding for hit scores

	1	883
Sc

1	885

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024