HitPredict

Interactor 1: SWI6 (P40381)
Chromatin-associated protein swi6
Gene: SWI6

Interactor 2: SWI6 (P40381)
Chromatin-associated protein swi6
Gene: SWI6

Species: Schizosaccharomyces pombe 972h-

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.87 1.00 0.936

The method score is based on:

Property Details
Experiments 28942089, 21211724, 21224386, 18716626, 23485968, 14663140
Identification Methods pull down, affinity chromatography technology, two hybrid, cosedimentation in solution, transmission electron microscopy
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains Chromo~Chromo, Chromo_shadow~Chromo_shadow
Common GO terms GO:0000122 - negative regulation of transcription by RNA polymerase II
GO:0000779 - condensed chromosome, centromeric region
GO:0000785 - chromatin
GO:0000792 - heterochromatin
GO:0003677 - DNA binding
and 21 others

more...
Homologous interactions 17

Homologous interactions

Color coding for hit scores

1 328
Sp

1 328
+ Sp
+ Sp
+ Sp
+ Dm
+ Hs
+ Hs
+ Hs
+ Dm
+ Hs
+ Hs
+ Dm
+ Dm
+ Hs
+ Sp
+ Hs
+ Hs
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024