HitPredict

Interactor 1: MSL1 (P40567)
U2 small nuclear ribonucleoprotein B'' (U2 snRNP B'')
Gene: MSL1

Interactor 2: RU2A (Q08963)
U2 small nuclear ribonucleoprotein A' (U2 snRNP A') (Looks exceptionally like U2A protein 1)
Gene: LEA1

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.93 1.00 0.969

The method score is based on:

Property Details
Experiments 9799242, 34349264, 37968396, 10369685, 16554755, 16429126, 16618970, 21558325
Identification Methods two hybrid, affinity chromatography technology, pull down, tandem affinity purification
Interaction Type physical association, direct interaction, association

The annotation score is based on:

Property Details
Interacting Pfam domains LRR_9~RRM_5
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex
GO:0005686 - U2 snRNP
GO:0030620 - U2 snRNA binding
and 2 others

more...
Homologous interactions 14

Homologous interactions

Color coding for hit scores

1 111
Sc

1 238
+ Dm
+ Sp
+ Hs
+ Zm
+ Ce
+ At
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ At
+ At

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024