HitPredict

Interactor 1: COP1 (P43254)
E3 ubiquitin-protein ligase COP1 (EC 2.3.2.27) (Constitutive photomorphogenesis protein 1) (RING-type E3 ubiquitin transferase COP1)
Gene: COP1

Interactor 2: SPA4 (Q94BM7)
Protein SPA1-RELATED 4
Gene: SPA4

Species: Arabidopsis thaliana

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.78 1.00 0.886

The method score is based on:

Property Details
Experiments 12887588, 18812498, 21798944
Identification Methods two hybrid, affinity chromatography technology, anti bait coimmunoprecipitation, pull down, two hybrid array, anti tag coimmunoprecipitation
Interaction Type direct interaction, physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains WD40~WD40
Common GO terms GO:0005634 - nucleus
GO:0009585 - red, far-red light phototransduction
GO:0009640 - photomorphogenesis
GO:0080008 - Cul4-RING E3 ubiquitin ligase complex
Homologous interactions 19

Homologous interactions

Color coding for hit scores

1 675
At

1 794
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Service provided by Combinatics, Japan

Last updated: 15 Jul 2024