HitPredict

Interactor 1: YJ11B (P47098)
Transposon Ty1-JR1 Gag-Pol polyprotein (Gag-Pol-p199) (TY1A-TY1B) (Transposon Ty1 TYA-TYB polyprotein) (p190) [Cleaved into: Capsid protein (CA) (Gag-p45) (p54); Ty1 protease (PR) (EC 3.4.23.-) (Pol-p20) (p23); Integrase (IN) (Pol-p71) (p84) (p90); Reverse transcriptase/ribonuclease H (RT) (RT-RH) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4) (Pol-p63) (p60)]
Gene: TY1B-JR1

Interactor 2: YO11B (Q12273)
Transposon Ty1-OL Gag-Pol polyprotein (Gag-Pol-p199) (TY1A-TY1B) (Transposon Ty1 TYA-TYB polyprotein) (p190) [Cleaved into: Capsid protein (CA) (Gag-p45) (p54); Ty1 protease (PR) (EC 3.4.23.-) (Pol-p20) (p23); Integrase (IN) (Pol-p71) (p84) (p90); Reverse transcriptase/ribonuclease H (RT) (RT-RH) (EC 2.7.7.49) (EC 2.7.7.7) (EC 3.1.26.4) (Pol-p63) (p60)]
Gene: TY1B-OL

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.618

The method score is based on:

Property	Details
Experiments	37968396
Identification Methods	affinity chromatography technology
Interaction Type	physical association

The annotation score is based on:

Property	Details
Interacting Pfam domains	rve~rve
Common GO terms	GO:0000943 - retrotransposon nucleocapsid GO:0003677 - DNA binding GO:0003723 - RNA binding GO:0003887 - DNA-directed DNA polymerase activity GO:0003964 - RNA-directed DNA polymerase activity and 12 others more... GO:0004190 - aspartic-type endopeptidase activity GO:0004523 - RNA-DNA hybrid ribonuclease activity GO:0004540 - RNA nuclease activity GO:0005524 - ATP binding GO:0005634 - nucleus GO:0005737 - cytoplasm GO:0006310 - DNA recombination GO:0006508 - proteolysis GO:0008233 - peptidase activity GO:0015074 - DNA integration GO:0032197 - retrotransposition GO:0046872 - metal ion binding
Homologous interactions	11

Homologous interactions

Color coding for hit scores

	1	1755
Sc

1	1755

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Last updated: 15 Jul 2024