HitPredict

Interactor 1: LSM7 (P53905)
U6 snRNA-associated Sm-like protein LSm7
Gene: LSM7

Interactor 2: LSM3 (P57743)
U6 snRNA-associated Sm-like protein LSm3 (SmX4 protein)
Gene: LSM3

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.93 1.00 0.968

The method score is based on:

Property Details
Experiments 10900456, 10428970, 10747033, 18719252, 16554755, 19740761, 37968396, 20108977
Identification Methods two hybrid, biochemical, affinity chromatography technology, tandem affinity purification
Interaction Type physical association, direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~LSM
Common GO terms GO:0000290 - deadenylation-dependent decapping of nuclear-transcribed mRNA
GO:0000398 - mRNA splicing, via spliceosome
GO:0000932 - P-body
GO:0003723 - RNA binding
GO:0005634 - nucleus
and 11 others

more...
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 115
Sc

1 89
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+ Dm
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Service provided by Combinatics, Japan

Last updated: 15 Jul 2024