HitPredict

Interactor 1: LSM7 (P53905)
U6 snRNA-associated Sm-like protein LSm7
Gene: LSM7

Interactor 2: CLF1 (Q12309)
Pre-mRNA-splicing factor CLF1 (Crooked neck-like factor 1) (PRP19-associated complex protein 77) (Synthetic lethal with CDC40 protein 3)
Gene: CLF1

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.479

Property	Details
Experiments	12509417
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0071004 - U2-type prespliceosome
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 115 Sc			1 687
+	Hs
		928016 RSMN_HUMAN (23-103): 1.07e-28: 105: 28.40		CRNL1_HUMAN (5-685): 4.45e-115: 367: 36.61
+	Hs
		539141 RSMB_HUMAN (23-103): 1.03e-27: 103: 28.40		CRNL1_HUMAN (5-685): 4.45e-115: 367: 36.61
+	Hs
		912106 RUXG_HUMAN (24-107): 3.5e-23: 86.9: 33.33		CRNL1_HUMAN (5-685): 4.45e-115: 367: 36.61
+	Zm
		28403 B4FDT9_MAIZE (8-102): 1.11e-21: 83.8: 12.12		A0A1D6JRD5_MAIZE (136-604): 1.77e-54: 202: 16.04
+	Hs
		928028 RSMN_HUMAN (23-103): 1.07e-28: 105: 28.40		SYF1_HUMAN (2-495): 4.59e-26: 116: 14.67
+	Hs
		539159 RSMB_HUMAN (23-103): 1.03e-27: 103: 28.40		SYF1_HUMAN (2-495): 4.59e-26: 116: 14.67
+	Hs
		912115 RUXG_HUMAN (24-107): 3.5e-23: 86.9: 33.33		SYF1_HUMAN (2-495): 4.59e-26: 116: 14.67
+	Hs
		539015 RSMB_HUMAN (23-103): 1.03e-27: 103: 28.40		CTR9_HUMAN (9-434): 5.17e-19: 94.2: 8.39
+	Sp
		1013603 RSMB_SCHPO (29-103): 7.22e-26: 95.8: 30.67		PRP1_SCHPO (1-392): 2.83e-20: 98.1: 13.22
+	Sc
		586429 LSM7_YEAST (1-115): 1.84e-38: 126: 100.00		PRP6_YEAST (28-198): 6.71e-10: 64.6: 13.30
+	Hs
		927951 RSMN_HUMAN (23-103): 1.07e-28: 105: 28.40		SART3_HUMAN (21-387): 2.31e-11: 69.2: 15.08
+	Hs
		1063305 LSM7_HUMAN (18-111): 2.12e-29: 103: 46.81		SART3_HUMAN (21-387): 2.31e-11: 69.2: 15.08
+	Hs
		538962 RSMB_HUMAN (23-103): 1.03e-27: 103: 28.40		SART3_HUMAN (21-387): 2.31e-11: 69.2: 15.08
+	Hs
		300110 RSMN_HUMAN (23-103): 1.07e-28: 105: 28.40		PRP6_HUMAN (449-672): 5e-10: 64.9: 11.89
+	Hs
		300046 RSMB_HUMAN (23-103): 1.03e-27: 103: 28.40		PRP6_HUMAN (449-672): 5e-10: 64.9: 11.89
+	Hs
		300284 LSM7_HUMAN (18-111): 2.12e-29: 103: 46.81		PRP6_HUMAN (449-672): 5e-10: 64.9: 11.89
+	Hs
		912158 LSM3_HUMAN (23-104): 3.17e-23: 87.7: 28.24		SART3_HUMAN (21-387): 2.31e-11: 69.2: 15.08
+	Hs
		912043 RUXG_HUMAN (24-107): 3.5e-23: 86.9: 33.33		SART3_HUMAN (21-387): 2.31e-11: 69.2: 15.08
+	Hs
		300101 LSM3_HUMAN (23-104): 3.17e-23: 87.7: 28.24		PRP6_HUMAN (449-672): 5e-10: 64.9: 11.89
+	Hs
		300100 RUXG_HUMAN (24-107): 3.5e-23: 86.9: 33.33		PRP6_HUMAN (449-672): 5e-10: 64.9: 11.89