HitPredict

Interactor 1: LSM3 (P57743)
U6 snRNA-associated Sm-like protein LSm3 (SmX4 protein)
Gene: LSM3

Interactor 2: PRP3 (Q03338)
U4/U6 small nuclear ribonucleoprotein PRP3 (Pre-mRNA-splicing factor 3)
Gene: PRP3

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.83 1.00 0.915

The method score is based on:

Property Details
Experiments 10747033, 16554755, 37968396, 14759368, 16429126
Identification Methods biochemical, affinity chromatography technology, anti tag coimmunoprecipitation, tandem affinity purification
Interaction Type physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains DUF1115~LSM
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0005634 - nucleus
GO:0005681 - spliceosomal complex
GO:0046540 - U4/U6 x U5 tri-snRNP complex
GO:0071001 - U4/U6 snRNP
Homologous interactions 12

Homologous interactions

Color coding for hit scores

1 89
Sc

1 469
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Service provided by Combinatics, Japan

Last updated: 15 Jul 2024