HitPredict

Interactor 1: D4GZX5 (D4GZX5)
DNA-directed RNA polymerase subunit beta (EC 2.7.7.6)
Gene: rpoB1

Interactor 2: D4GZX6 (D4GZX6)
DNA-directed RNA polymerase subunit Rpo1N (EC 2.7.7.6) (DNA-directed RNA polymerase subunit A')
Gene: rpoA1

Species: Haloferax volcanii DS2

Source: intact

Category: High-throughput

Confidence: High

Method score Annotation score Interaction score
0.33 1.00 0.575

The method score is based on:

Property Details
Experiments 34764944
Identification Methods pull down
Interaction Type association

The annotation score is based on:

Property Details
Interacting Pfam domains RNA_pol_Rpb1_4~RNA_pol_Rpb2_4, RNA_pol_Rpb1_4~RNA_pol_Rpb2_5, RNA_pol_Rpb1_5~RNA_pol_Rpb2_5, RNA_pol_Rpb1_1~RNA_pol_Rpb2_6, RNA_pol_Rpb1_2~RNA_pol_Rpb2_6, RNA_pol_Rpb1_3~RNA_pol_Rpb2_6, RNA_pol_Rpb1_4~RNA_pol_Rpb2_6, RNA_pol_Rpb1_5~RNA_pol_Rpb2_6, RNA_pol_Rpb1_1~RNA_pol_Rpb2_7, RNA_pol_Rpb1_2~RNA_pol_Rpb2_7, RNA_pol_Rpb1_5~RNA_pol_Rpb2_7
Common GO terms GO:0000428 - DNA-directed RNA polymerase complex
GO:0001055 - RNA polymerase II activity
GO:0003677 - DNA binding
GO:0005737 - cytoplasm
GO:0008270 - zinc ion binding
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 609
Hv

1 976
+ Bt
+ Hs
+ Dm
+ Hs
+ Hs
+ Sp
+ Hs
+ Pf
+ Sc
+ Sc
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ Sc
+ At
+ Bs
+ Mp
+ At

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Last updated: 15 Jul 2024