HitPredict

Interactor 1: LSM3 (P62310)
U6 snRNA-associated Sm-like protein LSm3
Gene: LSM3

Interactor 2: LSM2 (Q9Y333)
U6 snRNA-associated Sm-like protein LSm2 (Protein G7b) (Small nuclear ribonuclear protein D homolog) (snRNP core Sm-like protein Sm-x5)
Gene: LSM2

Species: Homo sapiens

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.97 1.00 0.990

The method score is based on:

Property Details
Experiments 14667819, 27107012, 29997244, 16169070, 29395067, 15231747, 22365833, 25416956, 16189514, 21516116, 32296183, 26264872, 33961781, unassigned1913, unassigned1304, 32814053
Identification Methods two hybrid, affinity chromatography technology, fluorescent resonance energy transfer, proximity labelling technology, two hybrid prey pooling approach, two hybrid array, validated two hybrid, barcode fusion genetics two hybrid, luminescence based mammalian interactome mapping, split luciferase complementation and 4 others

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Interaction Type direct interaction, physical association, association

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~LSM
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0000932 - P-body
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
and 8 others

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Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 102
Hs

1 95
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Service provided by Combinatics, Japan

Last updated: 15 Jul 2024