HitPredict

Interactor 1: LSM6 (P62312)
U6 snRNA-associated Sm-like protein LSm6
Gene: LSM6

Interactor 2: LSM7 (Q9UK45)
U6 snRNA-associated Sm-like protein LSm7
Gene: LSM7

Species: Homo sapiens

Source: mint

Category: High-throughput

Confidence: High

Method score Annotation score Interaction score
0.82 1.00 0.906

The method score is based on:

Property Details
Experiments 28514442, 33961781, 22365833, 15231747
Identification Methods affinity chromatography technology, two hybrid, anti tag coimmunoprecipitation
Interaction Type physical association, direct interaction, association

The annotation score is based on:

Property Details
Interacting Pfam domains LSM~LSM
Common GO terms GO:0000398 - mRNA splicing, via spliceosome
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0005688 - U6 snRNP
GO:0005829 - cytosol
and 3 others

more...
Homologous interactions 20

Homologous interactions (Top 20)

Color coding for hit scores

1 80
Hs

1 103
+ Hs
+ At
+ Dm
+ Hs
+ Hs
+ Hs
+ Hs
+ At
+ Hs
+ Hs
+ Dm
+ Hs
+ Hs
+ Dm
+ Hs
+ Hs
+ Hs
+ Hs
+ Hs
+ At

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024