HitPredict

Interactor 1: SMD2 (P62316)
Small nuclear ribonucleoprotein Sm D2 (Sm-D2) (snRNP core protein D2)
Gene: SNRPD2

Interactor 2: RSMN (P63162)
Small nuclear ribonucleoprotein-associated protein N (snRNP-N) (Sm protein D) (Sm-D) (Sm protein N) (Sm-N) (SmN) (Tissue-specific-splicing protein)
Gene: SNRPN

Species: Homo sapiens

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.65	1.00	0.811

The method score is based on:

Property	Details
Experiments	28514442, 33961781
Identification Methods	affinity chromatography technology, anti tag coimmunoprecipitation
Interaction Type	physical association, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	LSM~LSM
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0003723 - RNA binding GO:0005654 - nucleoplasm GO:0005681 - spliceosomal complex GO:0005682 - U5 snRNP and 7 others more... GO:0005685 - U1 snRNP GO:0005686 - U2 snRNP GO:0005687 - U4 snRNP GO:0008380 - RNA splicing GO:0030532 - small nuclear ribonucleoprotein complex GO:0046540 - U4/U6 x U5 tri-snRNP complex GO:0071013 - catalytic step 2 spliceosome
Homologous interactions	6

Homologous interactions

Color coding for hit scores

	1	118
Hs

1	240

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024