HitPredict

Interactor 1: SMD3 (P62318)
Small nuclear ribonucleoprotein Sm D3 (Sm-D3) (snRNP core protein D3)
Gene: SNRPD3

Interactor 2: SF3B2 (Q13435)
Splicing factor 3B subunit 2 (Pre-mRNA-splicing factor SF3b 145 kDa subunit) (SF3b145) (Spliceosome-associated protein 145) (SAP 145)
Gene: SF3B2

Species: Homo sapiens

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.62	0.60	0.611

The method score is based on:

Property	Details
Experiments	33961781, 37071682
Identification Methods	affinity chromatography technology, cross-linking study, anti tag coimmunoprecipitation
Interaction Type	physical association, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0003723 - RNA binding GO:0005634 - nucleus GO:0005654 - nucleoplasm GO:0005681 - spliceosomal complex and 8 others more... GO:0005684 - U2-type spliceosomal complex GO:0005686 - U2 snRNP GO:0005689 - U12-type spliceosomal complex GO:0008380 - RNA splicing GO:0071005 - U2-type precatalytic spliceosome GO:0071011 - precatalytic spliceosome GO:0071013 - catalytic step 2 spliceosome GO:1903241 - U2-type prespliceosome assembly
Homologous interactions	5

Homologous interactions

Color coding for hit scores

	1	126
Hs

1	895

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024