HitPredict

Interactor 1: LIS1 (P63004)
Platelet-activating factor acetylhydrolase IB subunit alpha (Lissencephaly-1 protein) (LIS-1) (PAF acetylhydrolase 45 kDa subunit) (PAF-AH 45 kDa subunit) (PAF-AH alpha) (PAFAH alpha)
Gene: Pafah1b1

Interactor 2: UBC (Q63429)
Polyubiquitin-C [Cleaved into: Ubiquitin; Ubiquitin-related]
Gene: UBC

Species: Rattus norvegicus

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.50	0.437

Property	Details
Experiments	22871113
Identification Methods	affinity chromatography technology
Interaction Type	physical association

Property	Details
Interacting Pfam domains	-
Common GO terms	-
Homologous interactions	13

Homologous interactions

Color coding for hit scores

	1 410 Rn			1 810
+	Dm
		477542 FBXW7_DROME (50-403): 1.13e-74: 254: 27.52		UBIQP_DROME (77-801): 0: 887: 97.38
+	Rn
		929756 RACK1_RAT (103-261): 2.4e-16: 81.3: 33.13		UBC_RAT (1-810): 0: 1000: 100.00
+	Hs
		476151 FBXW7_HUMAN (51-403): 1.97e-85: 276: 25.14		UBC_HUMAN (1-533): 0: 662: 99.81
+	Hs
		475563 WDR5_HUMAN (4-323): 3.59e-73: 233: 25.38		UBC_HUMAN (1-533): 0: 662: 99.81
+	Hs
		475589 GBB2_HUMAN (166-410): 5.38e-51: 176: 20.48		UBC_HUMAN (1-533): 0: 662: 99.81
+	Hs
		196947 PRP4_HUMAN (10-177): 3.12e-27: 115: 20.59		UBC_HUMAN (1-533): 0: 662: 99.81
+	Hs
		476181 SNR40_HUMAN (328-408): 4.84e-18: 86.8: 26.83		UBC_HUMAN (1-533): 0: 662: 99.81
+	Hs
		397828 LIS1_HUMAN (1-410): 7.99e-138: 401: 99.76		ISG15_HUMAN (228-380): 7.21e-29: 115: 32.69
+	Sc
		477281 MET30_YEAST (310-407): 2.57e-12: 70.5: 37.76		UBI4P_YEAST (457-801): 3.68e-132: 400: 90.73
+	Sc
		477295 LIS1_YEAST (248-408): 8.67e-09: 59.3: 26.88		UBI4P_YEAST (457-801): 3.68e-132: 400: 90.73
+	Hs
		903105 WDR5_HUMAN (4-323): 3.59e-73: 233: 25.38		RS27A_HUMAN (685-760): 5.08e-42: 152: 100.00
+	Mm
		476956 PLRG1_MOUSE (224-409): 7.92e-44: 161: 24.73		UBC_MOUSE (1-108): 6.19e-31: 132: 90.74
+	Hs
		397896 RACK1_HUMAN (103-261): 2.4e-16: 81.3: 33.13		ISG15_HUMAN (228-380): 7.21e-29: 115: 32.69