HitPredict

Interactor 1: RLT1 (F4HY56)
Homeobox-DDT domain protein RLT1 (Protein HOMEOBOX-1) (Protein RINGLET 1)
Gene: RLT1

Interactor 2: BRM (Q6EVK6)
ATP-dependent helicase BRM (EC 3.6.4.12) (Protein BRAHMA) (AtBRM) (Protein CHROMATIN REMODELING 2) (AtCHR2)
Gene: BRM

Species: Arabidopsis thaliana

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.481

Property	Details
Experiments	23449474
Identification Methods	two hybrid
Interaction Type	direct interaction

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003677 - DNA binding
Homologous interactions	18

Homologous interactions

Color coding for hit scores

	1 1705 At			1 2193
+	At
		95263 RLT1_ARATH (1-1705): 0: 1891: 100.00		ISW2_ARATH (835-1897): 0: 798: 22.57
+	At
		95260 RLT1_ARATH (1-1705): 0: 1891: 100.00		F4JY25_ARATH (808-1910): 0: 797: 22.30
+	At
		99084 F4K8S9_ARATH (1327-1662): 1.78e-96: 346: 28.57		ISW2_ARATH (835-1897): 0: 798: 22.57
+	Hs
		641393 PAX6_HUMAN (4-261): 1.62e-35: 143: 15.15		CHD3_HUMAN (501-2140): 0: 970: 17.32
+	Hs
		658750 BAZ2B_HUMAN (333-602): 3.84e-35: 149: 16.72		SMCA1_HUMAN (853-1867): 0: 824: 24.13
+	Hs
		229518 BAZ2B_HUMAN (333-602): 3.84e-35: 149: 16.72		SMCA5_HUMAN (815-1886): 0: 822: 23.38
+	Hs
		620178 PAX7_HUMAN (7-286): 1.84e-41: 162: 15.39		CHD6_HUMAN (498-2004): 0: 781: 18.04
+	Hs
		620135 PAX7_HUMAN (7-286): 1.84e-41: 162: 15.39		SMCA2_HUMAN (331-1759): 0: 778: 24.85
+	Dm
		65192 A8DYA3_DROME (280-585): 1.99e-37: 157: 14.38		ISWI_DROME (832-1900): 0: 782: 22.81
+	Hs
		641491 PAX6_HUMAN (4-261): 1.62e-35: 143: 15.15		CHD6_HUMAN (498-2004): 0: 781: 18.04
+	Hs
		641347 PAX6_HUMAN (4-261): 1.62e-35: 143: 15.15		SMCA2_HUMAN (331-1759): 0: 778: 24.85
+	Hs
		822622 LHX1_HUMAN (5-265): 2.36e-35: 142: 16.36		SMCA2_HUMAN (331-1759): 0: 778: 24.85
+	Hs
		197679 CRX_HUMAN (33-267): 1.83e-35: 139: 16.41		SMCA2_HUMAN (331-1759): 0: 778: 24.85
+	Hs
		620215 PAX7_HUMAN (7-286): 1.84e-41: 162: 15.39		CHD7_HUMAN (1-196): 6.98e-09: 63.7: 11.50
+	Hs
		641348 PAX6_HUMAN (4-261): 1.62e-35: 143: 15.15		SMCA4_HUMAN (151-484): 7.37e-09: 63.7: 8.98
+	Hs
		641583 PAX6_HUMAN (4-261): 1.62e-35: 143: 15.15		CHD7_HUMAN (1-196): 6.98e-09: 63.7: 11.50
+	Hs
		822688 LHX1_HUMAN (5-265): 2.36e-35: 142: 16.36		CHD7_HUMAN (1-196): 6.98e-09: 63.7: 11.50
+	Hs
		197844 CRX_HUMAN (33-267): 1.83e-35: 139: 16.41		CHD7_HUMAN (1-196): 6.98e-09: 63.7: 11.50