HitPredict

Interactor 1: SYD (F4IHS2)
Chromatin structure-remodeling complex protein SYD (EC 3.6.4.-) (ATP-dependent helicase SYD) (Protein CHROMATIN REMODELING 3) (Protein SPLAYED)
Gene: SYD

Interactor 2: HMGB4 (Q42344)
High mobility group B protein 4 (High mobility group protein G) (AtHMGgamma) (HMG gamma) (Nucleosome/chromatin assembly factor group D 04) (Nucleosome/chromatin assembly factor group D 4)
Gene: HMGB4

Species: Arabidopsis thaliana

Source: biogrid

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.38	0.60	0.481

Property	Details
Experiments	23449474
Identification Methods	two hybrid
Interaction Type	direct interaction

Property	Details
Interacting Pfam domains	-
Common GO terms	GO:0003677 - DNA binding GO:0003682 - chromatin binding GO:0005634 - nucleus GO:0005829 - cytosol
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 3574 At			1 138
+	Mm
		1142014 SMCA5_MOUSE (606-1464): 0: 825: 30.60		Q60I23_MOUSE (1-119): 3.87e-32: 117: 20.17
+	Hs
		229339 SMCA5_HUMAN (626-1464): 0: 824: 30.62		SOX2_HUMAN (4-119): 3.28e-31: 114: 22.41
+	Hs
		229376 SMCA5_HUMAN (626-1464): 0: 824: 30.62		SSRP1_HUMAN (18-104): 6.99e-27: 106: 35.63
+	Hs
		658657 SMCA1_HUMAN (636-1464): 0: 824: 31.13		SSRP1_HUMAN (18-104): 6.99e-27: 106: 35.63
+	Zm
		9144 A0A1D6FIP6_MAIZE (583-1494): 0: 778: 29.32		A0A1D6EUM9_MAIZE (7-135): 1.65e-34: 119: 44.96
+	Hs
		229284 SMCA5_HUMAN (626-1464): 0: 824: 30.62		HMGB1_HUMAN (6-115): 2.13e-15: 71.5: 34.82
+	Hs
		449557 SMCA1_HUMAN (636-1464): 0: 824: 31.13		HMGB1_HUMAN (6-115): 2.13e-15: 71.5: 34.82
+	Hs
		846863 SMCA2_HUMAN (124-1548): 0: 776: 27.94		SOX7_HUMAN (1-115): 1.05e-31: 117: 23.48
+	Hs
		817809 SMCA2_HUMAN (124-1548): 0: 776: 27.94		SOX2_HUMAN (4-119): 3.28e-31: 114: 22.41
+	Hs
		846868 SMCA2_HUMAN (124-1548): 0: 776: 27.94		SOX17_HUMAN (10-121): 6.44e-30: 113: 21.43
+	Mm
		818702 SMCA4_MOUSE (124-1471): 0: 772: 28.08		SOX2_MOUSE (1-119): 9.14e-32: 116: 20.17
+	Hs
		818102 CHD9_HUMAN (75-1384): 0: 766: 20.37		SOX2_HUMAN (4-119): 3.28e-31: 114: 22.41
+	Hs
		818484 CHD8_HUMAN (45-1384): 0: 765: 21.09		SOX2_HUMAN (4-119): 3.28e-31: 114: 22.41
+	Hs
		818056 CHD4_HUMAN (288-1684): 0: 762: 19.99		SOX2_HUMAN (4-119): 3.28e-31: 114: 22.41
+	Hs
		727856 CHD3_HUMAN (570-1677): 0: 758: 23.32		SOX6_HUMAN (1-138): 1.05e-28: 111: 19.58
+	Hs
		996673 CHD4_HUMAN (288-1684): 0: 762: 19.99		SSRP1_HUMAN (18-104): 6.99e-27: 106: 35.63
+	Hs
		225761 CHD5_HUMAN (541-1711): 0: 765: 21.21		SOX15_HUMAN (1-117): 2.45e-27: 102: 20.34
+	Hs
		727736 CHD3_HUMAN (570-1677): 0: 758: 23.32		SOX5_HUMAN (9-138): 1.3e-26: 105: 20.77
+	Sc
		514218 ISW2_YEAST (578-1450): 0: 797: 29.13		NHP6A_YEAST (31-108): 3.35e-12: 60.3: 42.31
+	Hs
		643272 SMCA2_HUMAN (124-1548): 0: 776: 27.94		HMGB2_HUMAN (6-115): 1.26e-12: 63.8: 33.04