HitPredict

Interactor 1: NUP49 (Q02199)
Nucleoporin NUP49/NSP49 (Nuclear pore protein NUP49/NSP49)
Gene: NUP49

Interactor 2: NUP49 (Q02199)
Nucleoporin NUP49/NSP49 (Nuclear pore protein NUP49/NSP49)
Gene: NUP49

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.75 0.60 0.672

The method score is based on:

Property Details
Experiments 18467557, 22940862, 23238392
Identification Methods protein complementation assay, affinity chromatography technology, dihydrofolate reductase reconstruction, fluorescence technology, electron microscopy, fluorescent resonance energy transfer
Interaction Type direct interaction, physical association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000055 - ribosomal large subunit export from nucleus
GO:0000973 - post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 - RNA binding
GO:0005635 - nuclear envelope
GO:0005643 - nuclear pore
and 13 others

more...
Homologous interactions 18

Homologous interactions

Color coding for hit scores

1 472
Sc

1 472
+ Sc
+ Sc
+ Sc
+ Sc
+ Sc
+ Hs
+ Hs
+ Sc
+ Sc
+ Sc
+ Hs
+ Hs
+ Tt
+ Sc
+ Hs
+ Sc
+ Sc
+ Sc

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024