HitPredict

Interactor 1: NUP49 (Q02199)
Nucleoporin NUP49/NSP49 (Nuclear pore protein NUP49/NSP49)
Gene: NUP49

Interactor 2: NU116 (Q02630)
Nucleoporin NUP116/NSP116 (Nuclear pore protein NUP116/NSP116)
Gene: NUP116

Species: Saccharomyces cerevisiae S288C

Source: intact

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.68 0.60 0.641

The method score is based on:

Property Details
Experiments 10684247, 18046405, 17418788
Identification Methods biochemical, affinity chromatography technology, pull down
Interaction Type association, physical association, direct interaction

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000055 - ribosomal large subunit export from nucleus
GO:0000973 - post-transcriptional tethering of RNA polymerase II gene DNA at nuclear periphery
GO:0003723 - RNA binding
GO:0005635 - nuclear envelope
GO:0005643 - nuclear pore
and 11 others

more...
Homologous interactions 19

Homologous interactions

Color coding for hit scores

1 472
Sc

1 1113
+ Sc
+ Sc
+ Sc
+ Sc
+ Sc
+ Hs
+ Sc
+ Sc
+ Sc
+ Sc
+ Hs
+ Sc
+ Sc
+ Tt
+ Hs
+ Sc
+ Sc
+ Sc
+ Hs

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024