HitPredict

Interactor 1: TRS31 (Q03337)
Trafficking protein particle complex subunit 31 (TRAPP subunit 31) (Transport protein particle 31 kDa subunit)
Gene: TRS31

Interactor 2: BET5 (Q03630)
Trafficking protein particle complex subunit BET5 (TRAPP subunit BET5) (Transport protein particle 18 kDa subunit)
Gene: BET5

Species: Saccharomyces cerevisiae S288C

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.81	1.00	0.904

The method score is based on:

Property	Details
Experiments	11283351, 17027922, 27872253, 29109089, 37968396
Identification Methods	two hybrid pooling approach, two hybrid, pull down, biochemical, affinity chromatography technology
Interaction Type	physical association, direct interaction, association

The annotation score is based on:

Property	Details
Interacting Pfam domains	Sybindin~TRAPP
Common GO terms	GO:0000407 - phagophore assembly site GO:0005783 - endoplasmic reticulum GO:0005829 - cytosol GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport GO:0006891 - intra-Golgi vesicle-mediated transport and 5 others more... GO:0016236 - macroautophagy GO:0042147 - retrograde transport, endosome to Golgi GO:1990070 - TRAPPI protein complex GO:1990071 - TRAPPII protein complex GO:1990072 - TRAPPIII protein complex
Homologous interactions	2

Homologous interactions

Color coding for hit scores

	1	283
Sc

1	159

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024