HitPredict

Interactor 1: UTP16 (Q08492)
U3 small nucleolar RNA-associated protein 16 (U3 snoRNA-associated protein 16) (Bud site selection protein 21) (U three protein 16)
Gene: BUD21

Interactor 2: NOP58 (Q12499)
Nucleolar protein 58 (Nucleolar protein 5)
Gene: NOP58

Species: Saccharomyces cerevisiae S288C

Source: mint

Category: Small-scale

Confidence: High

Method score Annotation score Interaction score
0.77 0.60 0.683

The method score is based on:

Property Details
Experiments 16554755, 37968396, 12068309, 21558325
Identification Methods affinity chromatography technology, tandem affinity purification
Interaction Type physical association

The annotation score is based on:

Property Details
Interacting Pfam domains -
Common GO terms GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005730 - nucleolus
GO:0030490 - maturation of SSU-rRNA
GO:0030686 - 90S preribosome
and 1 others

more...
Homologous interactions 1

Homologous interactions

Color coding for hit scores

1 214
Sc

1 511
+ Sc

Service provided by Combinatics, Japan

Last updated: 15 Jul 2024