Protein: RBM47
RNA-binding protein 47 (RNA-binding motif protein 47)

Gene: RBM47
Organism: Homo sapiens
Interactions: 196
UniProt ID: A0AV96

Gene Ontology (top 5):
GO:0000381 - regulation of alternative mRNA splicing, via spliceosome
GO:0002244 - hematopoietic progenitor cell differentiation
GO:0003723 - RNA binding
GO:0003729 - mRNA binding
GO:0003730 - mRNA 3'-UTR binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

47718

IF2B3
Insulin-like growth factor 2 mRNA-binding protein 3

2

19

High-throughput

0.789

High

47799

LARP4
La-related protein 4

2

20

High-throughput

0.789

High

47908

IF2B2
Insulin-like growth factor 2 mRNA-binding protein 2

2

20

High-throughput

0.789

High

47817

CELF5
CUGBP Elav-like family member 5

2

18

High-throughput

0.783

High

47882

RFOX1
RNA binding protein fox-1 homolog 1

2

18

High-throughput

0.783

High

47897

KCC2A
Calcium/calmodulin-dependent protein kinase type II subunit alpha

2

0

High-throughput

0.742

High

47740

HNRPC
Heterogeneous nuclear ribonucleoproteins C1/C2

1

20

High-throughput

0.691

High

47746

HNRPL
Heterogeneous nuclear ribonucleoprotein L

1

17

High-throughput

0.691

High

47760

PRR3
Proline-rich protein 3

1

4

High-throughput

0.691

High

47768

NCBP1
Nuclear cap-binding protein subunit 1

1

5

High-throughput

0.691

High

47769

ELAV2
ELAV-like protein 2

1

18

High-throughput

0.691

High

47793

LAR1B
La-related protein 1B

1

20

High-throughput

0.691

High

47798

LARP1
La-related protein 1

1

20

High-throughput

0.691

High

47808

RBM45
RNA-binding protein 45

1

19

High-throughput

0.691

High

47822

ZCRB1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1

1

17

High-throughput

0.691

High

47823

RBM46
Probable RNA-binding protein 46

1

14

High-throughput

0.691

High

47828

DYRK2
Dual specificity tyrosine-phosphorylation-regulated kinase 2

1

8

High-throughput

0.691

High

47836

RMXL1
RNA binding motif protein, X-linked-like-1

1

20

High-throughput

0.691

High

47845

ZFR
Zinc finger RNA-binding protein

1

8

High-throughput

0.691

High

47903

RBM19
Probable RNA-binding protein 19

1

17

High-throughput

0.691

High

47794

Z385C
Zinc finger protein 385C

1

2

High-throughput

0.665

High

47724

MSI1H
RNA-binding protein Musashi homolog 1

1

19

High-throughput

0.618

High

47728

CSDE1
Cold shock domain-containing protein E1

1

2

High-throughput

0.618

High

47731

CELF2
CUGBP Elav-like family member 2

1

18

High-throughput

0.618

High

47732

PTBP3
Polypyrimidine tract-binding protein 3

1

15

High-throughput

0.618

High

47737

RAF1
RAF proto-oncogene serine/threonine-protein kinase

1

9

High-throughput

0.618

High

47742

PABP1
Polyadenylate-binding protein 1

1

17

High-throughput

0.618

High

47750

RBMS1
RNA-binding motif, single-stranded-interacting protein 1

1

18

High-throughput

0.618

High

47755

HNRPF
Heterogeneous nuclear ribonucleoprotein F

1

17

High-throughput

0.618

High

47766

TIAR
Nucleolysin TIAR

1

16

High-throughput

0.618

High

47770

PABP4
Polyadenylate-binding protein 4

1

17

High-throughput

0.618

High

47780

RBMS2
RNA-binding motif, single-stranded-interacting protein 2

1

18

High-throughput

0.618

High

47781

ELAV1
ELAV-like protein 1

1

17

High-throughput

0.618

High

47792

MBNL2
Muscleblind-like protein 2

1

1

High-throughput

0.618

High

47810

Z3H7A
Zinc finger CCCH domain-containing protein 7A

1

5

High-throughput

0.618

High

47813

RAVR1
Ribonucleoprotein PTB-binding 1

1

17

High-throughput

0.618

High

47827

LAR4B
La-related protein 4B

1

20

High-throughput

0.618

High

47831

CELF1
CUGBP Elav-like family member 1

1

18

High-throughput

0.618

High

47833

DAZL
Deleted in azoospermia-like

1

18

High-throughput

0.618

High

47834

RBPMS
RNA-binding protein with multiple splicing

1

3

High-throughput

0.618

High

47839

DAZP1
DAZ-associated protein 1

1

18

High-throughput

0.618

High

47858

MKRN2
E3 ubiquitin-protein ligase makorin-2

1

16

High-throughput

0.618

High

47869

RC3H2
Roquin-2

1

13

High-throughput

0.618

High

47874

A1CF
APOBEC1 complementation factor

1

14

High-throughput

0.618

High

47875

MBNL1
Muscleblind-like protein 1

1

1

High-throughput

0.618

High

47887

IF2B1
Insulin-like growth factor 2 mRNA-binding protein 1

1

20

High-throughput

0.618

High

47894

G3BP2
Ras GTPase-activating protein-binding protein 2

1

17

High-throughput

0.618

High

47719

P3C2A
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha

2

3

High-throughput

0.611

High

47775

PUM1
Pumilio homolog 1

2

9

High-throughput

0.611

High

47821

PUM2
Pumilio homolog 2

2

9

High-throughput

0.611

High

47832

RENT1
Regulator of nonsense transcripts 1

2

10

High-throughput

0.611

High

47852

ATX2
Ataxin-2

2

16

High-throughput

0.611

High

47886

F120A
Constitutive coactivator of PPAR-gamma-like protein 1

2

7

High-throughput

0.611

High

47751

OTX2
Homeobox protein OTX2

2

2

High-throughput

0.606

High

47757

PCBP3
Poly(rC)-binding protein 3

2

20

High-throughput

0.606

High

47796

CA094
Uncharacterized protein C1orf94

3

1

High-throughput

0.597

High

47752

HELZ
Probable helicase with zinc finger domain

1

10

High-throughput

0.575

High

47885

PRR13
Proline-rich protein 13

2

1

High-throughput

0.553

High

47720

CTRO
Citron Rho-interacting kinase

1

10

High-throughput

0.553

High

47734

TRUB2
Pseudouridylate synthase TRUB2, mitochondrial

1

3

High-throughput

0.536

High

47741

RM03
Large ribosomal subunit protein uL3m

1

2

High-throughput

0.536

High

47758

RS6
Small ribosomal subunit protein eS6

1

2

High-throughput

0.536

High

47759

RS27A
Ubiquitin-ribosomal protein eS31 fusion protein

1

7

High-throughput

0.536

High

47762

RT05
Small ribosomal subunit protein uS5m

1

4

High-throughput

0.536

High

47763

RT11
Small ribosomal subunit protein uS11m

1

2

High-throughput

0.536

High

47764

RT09
Small ribosomal subunit protein uS9m

1

3

High-throughput

0.536

High

47771

ATM
Serine-protein kinase ATM

1

4

High-throughput

0.536

High

47772

PICAL
Phosphatidylinositol-binding clathrin assembly protein

1

1

High-throughput

0.536

High

47800

DHX30
ATP-dependent RNA helicase DHX30

1

8

High-throughput

0.536

High

47804

NOP9
Nucleolar protein 9

1

10

High-throughput

0.536

High

47809

ABC3F
DNA dC->dU-editing enzyme APOBEC-3F

1

17

High-throughput

0.536

High

47812

SUGP2
SURP and G-patch domain-containing protein 2

1

1

High-throughput

0.536

High

47825

LMO7
LIM domain only protein 7

1

1

High-throughput

0.536

High

47838

RT24
Small ribosomal subunit protein uS3m

1

1

High-throughput

0.536

High

47840

TRI11
E3 ubiquitin-protein ligase TRIM11

1

2

High-throughput

0.536

High

47842

CPNE2
Copine-2

1

3

High-throughput

0.536

High

47844

RCC1L
RCC1-like G exchanging factor-like protein

1

3

High-throughput

0.536

High

47847

YTDC1
YTH domain-containing protein 1

1

14

High-throughput

0.536

High

47857

RT26
Small ribosomal subunit protein mS26

1

2

High-throughput

0.536

High

47859

EPN3
Epsin-3

1

2

High-throughput

0.536

High

47868

RM44
Large ribosomal subunit protein mL44

1

1

High-throughput

0.536

High

47870

MOV10
Helicase MOV-10

1

10

High-throughput

0.536

High

47873

NGRN
Neugrin

1

1

High-throughput

0.536

High

47878

ZCHC3
Zinc finger CCHC domain-containing protein 3

1

7

High-throughput

0.536

High

47879

STAU2
Double-stranded RNA-binding protein Staufen homolog 2

1

17

High-throughput

0.536

High

47880

DDX28
Probable ATP-dependent RNA helicase DDX28

1

5

High-throughput

0.536

High

47884

FAKD2
FAST kinase domain-containing protein 2, mitochondrial

1

1

High-throughput

0.536

High

47888

RM15
Large ribosomal subunit protein uL15m

1

1

High-throughput

0.536

High

47890

ABC3B
DNA dC->dU-editing enzyme APOBEC-3B

1

17

High-throughput

0.536

High

47891

SRP68
Signal recognition particle subunit SRP68

1

2

High-throughput

0.536

High

47892

HERC5
E3 ISG15--protein ligase HERC5

1

9

High-throughput

0.536

High

47725

SYNJ1
Synaptojanin-1

1

0

High-throughput

0.513

High

47727

PTCD1
Pentatricopeptide repeat-containing protein 1, mitochondrial

1

0

High-throughput

0.513

High

47745

PIP
Prolactin-inducible protein

1

0

High-throughput

0.513

High

47749

RL17
Large ribosomal subunit protein uL22

1

0

High-throughput

0.513

High

47786

ZN326
DBIRD complex subunit ZNF326

1

0

High-throughput

0.513

High

47795

RUSD3
Mitochondrial mRNA pseudouridine synthase RPUSD3

1

0

High-throughput

0.513

High

47815

SUV3
ATP-dependent RNA helicase SUPV3L1, mitochondrial

1

0

High-throughput

0.513

High

47864

PHAX
Phosphorylated adapter RNA export protein

1

0

High-throughput

0.513

High

47865

PAAT
ATPase PAAT

1

0

High-throughput

0.513

High

47900

RT07
Small ribosomal subunit protein uS7m

1

0

High-throughput

0.513

High

47901

SYYM
Tyrosine--tRNA ligase, mitochondrial

1

0

High-throughput

0.513

High

47907

RM42
Large ribosomal subunit protein mL42

1

0

High-throughput

0.513

High

47730

EPN2
Epsin-2

1

3

High-throughput

0.489

High

47778

RBP1
RalA-binding protein 1

1

6

High-throughput

0.489

High

47814

M21D2
Nucleotidyltransferase MB21D2

1

1

High-throughput

0.489

High

47835

MTEF3
Transcription termination factor 3, mitochondrial

1

2

High-throughput

0.489

High

47837

MASU1
Mitochondrial assembly of ribosomal large subunit protein 1

1

1

High-throughput

0.489

High

47898

RT33
Small ribosomal subunit protein mS33

1

1

High-throughput

0.489

High

47747

ZEP1
Zinc finger protein 40

1

3

High-throughput

0.481

High

47846

HSFY1
Heat shock transcription factor, Y-linked

1

1

High-throughput

0.481

High

47713

MEX3A
RNA-binding protein MEX3A

1

20

High-throughput

0.479

High

47717

MCRI1
Mapk-regulated corepressor-interacting protein 1

1

3

High-throughput

0.479

High

47723

CASC3
Protein CASC3

1

6

High-throughput

0.479

High

47735

TOP3B
DNA topoisomerase 3-beta-1

1

2

High-throughput

0.479

High

47738

TYSY
Thymidylate synthase

1

1

High-throughput

0.479

High

47739

ADT2
ADP/ATP translocase 2

1

4

High-throughput

0.479

High

47744

ADT3
ADP/ATP translocase 3

1

5

High-throughput

0.479

High

47748

RS2
Small ribosomal subunit protein uS5

1

4

High-throughput

0.479

High

47753

PRC2A
Protein PRRC2A

1

18

High-throughput

0.479

High

47765

VIGLN
Vigilin

1

20

High-throughput

0.479

High

47767

OTUD4
OTU domain-containing protein 4

1

7

High-throughput

0.479

High

47773

UBP2L
Ubiquitin-associated protein 2-like

1

10

High-throughput

0.479

High

47774

EI2BA
Translation initiation factor eIF2B subunit alpha

1

1

High-throughput

0.479

High

47776

R3HD1
R3H domain-containing protein 1

1

7

High-throughput

0.479

High

47777

KIF14
Kinesin-like protein KIF14

1

7

High-throughput

0.479

High

47779

PCBP1
Poly(rC)-binding protein 1

1

20

High-throughput

0.479

High

47783

CPEB4
Cytoplasmic polyadenylation element-binding protein 4

1

17

High-throughput

0.479

High

47784

LSM12
Protein LSM12

1

4

High-throughput

0.479

High

47785

FND3B
Fibronectin type III domain-containing protein 3B

1

7

High-throughput

0.479

High

47787

PRC2B
Protein PRRC2B

1

16

High-throughput

0.479

High

47789

UBAP2
Ubiquitin-associated protein 2

1

8

High-throughput

0.479

High

47790

TUT4
Terminal uridylyltransferase 4

1

3

High-throughput

0.479

High

47791

RC3H1
Roquin-1

1

11

High-throughput

0.479

High

47801

YTHD3
YTH domain-containing family protein 3

1

14

High-throughput

0.479

High

47802

PATL1
Protein PAT1 homolog 1

1

3

High-throughput

0.479

High

47805

N4BP2
NEDD4-binding protein 2

1

2

High-throughput

0.479

High

47806

DTX2
Probable E3 ubiquitin-protein ligase DTX2

1

1

High-throughput

0.479

High

47807

MEX3D
RNA-binding protein MEX3D

1

20

High-throughput

0.479

High

47811

ANKH1
Ankyrin repeat and KH domain-containing protein 1

1

6

High-throughput

0.479

High

47819

LS14A
Protein LSM14 homolog A

1

5

High-throughput

0.479

High

47824

SMAP2
Stromal membrane-associated protein 2

1

2

High-throughput

0.479

High

47826

SMG7
Nonsense-mediated mRNA decay factor SMG7

1

4

High-throughput

0.479

High

47829

AKAP1
A-kinase anchor protein 1, mitochondrial

1

5

High-throughput

0.479

High

47843

FUBP3
Far upstream element-binding protein 3

1

20

High-throughput

0.479

High

47848

QKI
KH domain-containing RNA-binding protein QKI

1

8

High-throughput

0.479

High

47850

SEBP2
Selenocysteine insertion sequence-binding protein 2

1

2

High-throughput

0.479

High

47851

RING2
E3 ubiquitin-protein ligase RING2

1

14

High-throughput

0.479

High

47855

MCRI2
MAPK regulated corepressor interacting protein 2

1

3

High-throughput

0.479

High

47856

YTHD1
YTH domain-containing family protein 1

1

14

High-throughput

0.479

High

47860

SMRCD
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1

1

10

High-throughput

0.479

High

47861

BICC1
Protein bicaudal C homolog 1

1

20

High-throughput

0.479

High

47862

ESRP2
Epithelial splicing regulatory protein 2

1

17

High-throughput

0.479

High

47863

TDRD3
Tudor domain-containing protein 3

1

2

High-throughput

0.479

High

47866

ECT2
Protein ECT2

1

6

High-throughput

0.479

High

47872

ALG13
UDP-N-acetylglucosamine transferase subunit ALG13

1

8

High-throughput

0.479

High

47876

4ET
Eukaryotic translation initiation factor 4E transporter

1

1

High-throughput

0.479

High

47889

SEC63
Translocation protein SEC63 homolog

1

3

High-throughput

0.479

High

47893

AGO2
Protein argonaute-2

1

10

High-throughput

0.479

High

47895

TNR6B
Trinucleotide repeat-containing gene 6B protein

1

5

High-throughput

0.479

High

47896

SMG5
Nonsense-mediated mRNA decay factor SMG5

1

4

High-throughput

0.479

High

47899

R3HD2
R3H domain-containing protein 2

1

6

High-throughput

0.479

High

47905

PRC2C
Protein PRRC2C

1

15

High-throughput

0.479

High

47906

YTHD2
YTH domain-containing family protein 2

1

15

High-throughput

0.479

High

47716

B7ZLH0
FAM22F protein

1

1

High-throughput

0.470

High

47726

PFD1
Prefoldin subunit 1

1

0

High-throughput

0.458

High

47803

PEG10
Retrotransposon-derived protein PEG10

1

0

High-throughput

0.458

High

47816

ZCH24
Zinc finger CCHC domain-containing protein 24

1

0

High-throughput

0.458

High

47853

TBA1C
Tubulin alpha-1C chain

1

0

High-throughput

0.458

High

47830

ESR2
Estrogen receptor beta

1

19

High-throughput

0.445

High

47714

NTM2F
NUT family member 2F

1

1

High-throughput

0.439

High

47736

INS
Insulin [Cleaved into: Insulin B chain; Insulin A chain]

1

1

High-throughput

0.437

High

47743

ADT1
ADP/ATP translocase 1

1

3

High-throughput

0.437

High

47756

UCP3
Putative mitochondrial transporter UCP3

1

5

Small-scale

0.437

High

47797

CEP85
Centrosomal protein of 85 kDa

1

10

High-throughput

0.437

High

47877

SYIM
Isoleucine--tRNA ligase, mitochondrial

1

1

High-throughput

0.437

High

47883

RM16
Large ribosomal subunit protein uL16m

1

1

High-throughput

0.437

High

47902

RT02
Small ribosomal subunit protein uS2m

1

1

High-throughput

0.437

High

47788

CJ055
Uncharacterized protein C10orf55

2

0

High-throughput

0.316

High

47761

RT25
Small ribosomal subunit protein mS25

1

0

High-throughput

0.279

Low

47841

STALP
AMSH-like protease

1

0

High-throughput

0.279

Low

47881

RT18A
Large ribosomal subunit protein mL66

1

0

High-throughput

0.279

Low

47715

NUD19
Acyl-coenzyme A diphosphatase NUDT19

1

0

High-throughput

0.249

Low

47721

ACOT8
Acyl-coenzyme A thioesterase 8

1

0

High-throughput

0.249

Low

47722

SCAM3
Secretory carrier-associated membrane protein 3

1

0

High-throughput

0.249

Low

47729

ATP5L
ATP synthase subunit g, mitochondrial

1

0

High-throughput

0.249

Low

47733

FADS2
Acyl-CoA 6-desaturase

1

0

High-throughput

0.249

Low

47754

PTSS1
Phosphatidylserine synthase 1

1

0

High-throughput

0.249

Low

47782

CLPP
ATP-dependent Clp protease proteolytic subunit, mitochondrial

1

0

High-throughput

0.249

Low

47818

UBAC2
Ubiquitin-associated domain-containing protein 2

1

0

High-throughput

0.249

Low

47820

NUP35
Nucleoporin NUP35

1

0

High-throughput

0.249

Low

47849

TM209
Transmembrane protein 209

1

0

High-throughput

0.249

Low

47854

DERL1
Derlin-1

1

0

High-throughput

0.249

Low

47867

SFXN1
Sideroflexin-1

1

0

High-throughput

0.249

Low

47871

TM9S3
Transmembrane 9 superfamily member 3

1

0

High-throughput

0.249

Low

47904

FARP1
FERM, ARHGEF and pleckstrin domain-containing protein 1

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024