Protein: CNOT9
CCR4-NOT transcription complex subunit 9 (Cell differentiation protein RQCD1 homolog) (Rcd-1)

Gene: CNOT9
Organism: Homo sapiens
Interactions: 225
UniProt ID: Q92600

Gene Ontology (top 5):
GO:0000289 - nuclear-transcribed mRNA poly(A) tail shortening
GO:0000932 - P-body
GO:0005154 - epidermal growth factor receptor binding
GO:0005634 - nucleus
GO:0005829 - cytosol

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

61432

CNOT1
CCR4-NOT transcription complex subunit 1

4

3

Small-scale

0.908

High

1136205

RC3H1
Roquin-1

5

2

Small-scale

0.702

High

258869

GA45B
Growth arrest and DNA damage-inducible protein GADD45 beta

4

3

High-throughput

0.698

High

1267895

CNOT7
CCR4-NOT transcription complex subunit 7

4

5

High-throughput

0.694

High

1267887

CNOT2
CCR4-NOT transcription complex subunit 2

4

7

High-throughput

0.686

High

813115

CAZA2
F-actin-capping protein subunit alpha-2

3

1

High-throughput

0.667

High

1233526

MINK1
Misshapen-like kinase 1

3

1

High-throughput

0.667

High

1267897

CNO11
CCR4-NOT transcription complex subunit 11

4

0

High-throughput

0.664

High

1267844

CNO6L
CCR4-NOT transcription complex subunit 6-like

3

5

Small-scale

0.662

High

1267830

CNOT9
CCR4-NOT transcription complex subunit 9

1

2

Small-scale

0.647

High

1242614

TNR6A
Trinucleotide repeat-containing gene 6A protein

3

2

Small-scale

0.646

High

1267872

RC3H2
Roquin-2

3

3

Small-scale

0.640

High

841395

TOB1
Protein Tob1

3

0

Small-scale

0.634

High

888497

NANO2
Nanos homolog 2

2

1

High-throughput

0.628

High

264370

GGYF1
GRB10-interacting GYF protein 1

2

2

Small-scale

0.624

High

1167941

GGYF2
GRB10-interacting GYF protein 2

2

1

Small-scale

0.624

High

257390

CNOT3
CCR4-NOT transcription complex subunit 3

2

9

High-throughput

0.611

High

1266819

TM131
Transmembrane protein 131

2

2

High-throughput

0.611

High

309871

GA45G
Growth arrest and DNA damage-inducible protein GADD45 gamma

2

3

High-throughput

0.606

High

622967

GA45A
Growth arrest and DNA damage-inducible protein GADD45 alpha

2

3

High-throughput

0.606

High

813643

CAPZB
F-actin-capping protein subunit beta

2

0

High-throughput

0.602

High

1223693

IZUM1
Izumo sperm-egg fusion protein 1

2

0

High-throughput

0.602

High

1267900

CNOT6
CCR4-NOT transcription complex subunit 6

2

5

Small-scale

0.601

High

317676

CNOT4
CCR4-NOT transcription complex subunit 4

2

2

Small-scale

0.595

High

1267874

TNR6C
Trinucleotide repeat-containing gene 6C protein

2

3

Small-scale

0.594

High

1050734

FHL2
Four and a half LIM domains protein 2

2

0

High-throughput

0.585

High

1267870

CNO10
CCR4-NOT transcription complex subunit 10

2

0

High-throughput

0.585

High

1267873

GPBL1
Vasculin-like protein 1

2

0

High-throughput

0.585

High

160684

AURKA
Aurora kinase A

2

1

High-throughput

0.584

High

370118

ESR1
Estrogen receptor

2

1

High-throughput

0.571

High

1267863

TB182
182 kDa tankyrase-1-binding protein

2

2

Small-scale

0.571

High

681957

AKT1
RAC-alpha serine/threonine-protein kinase

1

1

Small-scale

0.561

High

302576

CE152
Centrosomal protein of 152 kDa

2

0

High-throughput

0.559

High

1219204

Z3H7A
Zinc finger CCCH domain-containing protein 7A

2

0

High-throughput

0.559

High

1230155

CNTRB
Centrobin

2

0

High-throughput

0.559

High

338780

EGFR
Epidermal growth factor receptor

1

0

Small-scale

0.537

High

1031697

GRB10
Growth factor receptor-bound protein 10

1

0

Small-scale

0.537

High

62093

EPAB2
Embryonic polyadenylate-binding protein 2

1

1

High-throughput

0.536

High

796149

MAGA9
Melanoma-associated antigen 9

1

1

High-throughput

0.536

High

857182

CAZA1
F-actin-capping protein subunit alpha-1

1

1

High-throughput

0.536

High

1251661

UHMK1
Serine/threonine-protein kinase Kist

1

1

High-throughput

0.536

High

1267842

RBM18
Probable RNA-binding protein 18

1

1

High-throughput

0.536

High

282241

SEGN
Secretagogin

1

0

High-throughput

0.513

High

571180

EGLN
Endoglin

1

0

High-throughput

0.513

High

598991

FPR1
fMet-Leu-Phe receptor

1

0

High-throughput

0.513

High

1200186

TRI74
Tripartite motif-containing protein 74

1

0

High-throughput

0.513

High

1218863

HSC20
Iron-sulfur cluster co-chaperone protein HscB

1

0

High-throughput

0.513

High

1267833

THRSP
Thyroid hormone-inducible hepatic protein

1

0

High-throughput

0.513

High

1267834

TANK
TRAF family member-associated NF-kappa-B activator

1

0

High-throughput

0.513

High

163070

XPO1
Exportin-1

1

2

High-throughput

0.479

High

257674

ANR17
Ankyrin repeat domain-containing protein 17

1

1

High-throughput

0.479

High

300438

PCF11
Pre-mRNA cleavage complex 2 protein Pcf11

1

1

High-throughput

0.479

High

347470

MYC
Myc proto-oncogene protein

1

3

High-throughput

0.479

High

486940

MYBB
Myb-related protein B

1

11

High-throughput

0.479

High

626213

APC
Adenomatous polyposis coli protein

1

2

High-throughput

0.479

High

640566

DDX6
Probable ATP-dependent RNA helicase DDX6

1

1

High-throughput

0.479

High

644298

TTP
mRNA decay activator protein ZFP36

1

6

High-throughput

0.479

High

668401

RBMS1
RNA-binding motif, single-stranded-interacting protein 1

1

1

High-throughput

0.479

High

682915

HNRH1
Heterogeneous nuclear ribonucleoprotein H

1

1

High-throughput

0.479

High

781643

ETV6
Transcription factor ETV6

1

1

High-throughput

0.479

High

784055

KPCI
Protein kinase C iota type

1

1

High-throughput

0.479

High

794557

ETV4
ETS translocation variant 4

1

1

High-throughput

0.479

High

820991

PRC2A
Protein PRRC2A

1

3

High-throughput

0.479

High

840290

PEX5
Peroxisomal targeting signal 1 receptor

1

1

High-throughput

0.479

High

966609

OTUD4
OTU domain-containing protein 4

1

1

High-throughput

0.479

High

1022847

STRN3
Striatin-3

1

2

High-throughput

0.479

High

1036769

SQSTM
Sequestosome-1

1

1

High-throughput

0.479

High

1044004

DYR1A
Dual specificity tyrosine-phosphorylation-regulated kinase 1A

1

1

High-throughput

0.479

High

1049855

UBP2L
Ubiquitin-associated protein 2-like

1

2

High-throughput

0.479

High

1056709

PUM1
Pumilio homolog 1

1

5

High-throughput

0.479

High

1089541

CPEB4
Cytoplasmic polyadenylation element-binding protein 4

1

2

High-throughput

0.479

High

1123123

PAN3
PAN2-PAN3 deadenylation complex subunit PAN3

1

1

High-throughput

0.479

High

1134122

UBAP2
Ubiquitin-associated protein 2

1

2

High-throughput

0.479

High

1146681

A16L1
Autophagy-related protein 16-1

1

2

High-throughput

0.479

High

1168394

LMTK1
Serine/threonine-protein kinase LMTK1

1

1

High-throughput

0.479

High

1192345

YTHD3
YTH domain-containing family protein 3

1

4

High-throughput

0.479

High

1198367

PATL1
Protein PAT1 homolog 1

1

2

High-throughput

0.479

High

1222294

RAVR1
Ribonucleoprotein PTB-binding 1

1

1

High-throughput

0.479

High

1252100

PUM2
Pumilio homolog 2

1

5

High-throughput

0.479

High

1266633

SMG7
Nonsense-mediated mRNA decay factor SMG7

1

1

High-throughput

0.479

High

1267832

ESR2
Estrogen receptor beta

1

1

High-throughput

0.479

High

1267836

DAZL
Deleted in azoospermia-like

1

2

High-throughput

0.479

High

1267848

NEK1
Serine/threonine-protein kinase Nek1

1

1

High-throughput

0.479

High

1267849

PASK
PAS domain-containing serine/threonine-protein kinase

1

2

High-throughput

0.479

High

1267850

PSMD1
26S proteasome non-ATPase regulatory subunit 1

1

1

High-throughput

0.479

High

1267853

M3K3
Mitogen-activated protein kinase kinase kinase 3

1

1

High-throughput

0.479

High

1267860

YTHD1
YTH domain-containing family protein 1

1

4

High-throughput

0.479

High

1267861

CPEB1
Cytoplasmic polyadenylation element-binding protein 1

1

1

High-throughput

0.479

High

1267871

AGO3
Protein argonaute-3

1

2

High-throughput

0.479

High

1267880

STRN4
Striatin-4

1

1

High-throughput

0.479

High

1267891

CNOT8
CCR4-NOT transcription complex subunit 8

1

5

High-throughput

0.479

High

1267894

DDX20
Probable ATP-dependent RNA helicase DDX20

1

2

High-throughput

0.479

High

1267896

AGO2
Protein argonaute-2

1

2

High-throughput

0.479

High

1267898

AGO1
Protein argonaute-1

1

2

High-throughput

0.479

High

1267904

TNR6B
Trinucleotide repeat-containing gene 6B protein

1

2

High-throughput

0.479

High

1267905

SMG5
Nonsense-mediated mRNA decay factor SMG5

1

1

High-throughput

0.479

High

1267906

TBD2B
TBC1 domain family member 2B

1

1

High-throughput

0.479

High

1267911

R3HD2
R3H domain-containing protein 2

1

1

High-throughput

0.479

High

1267913

PRC2C
Protein PRRC2C

1

3

High-throughput

0.479

High

1267914

YTHD2
YTH domain-containing family protein 2

1

4

High-throughput

0.479

High

1267916

MAGD1
Melanoma-associated antigen D1

1

1

High-throughput

0.479

High

128890

P3C2A
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha

1

0

High-throughput

0.458

High

164990

SC16A
Protein transport protein Sec16A

1

0

High-throughput

0.458

High

166291

GRRE1
Granule associated Rac and RHOG effector protein 1

1

0

High-throughput

0.458

High

200641

CP110
Centriolar coiled-coil protein of 110 kDa

1

0

High-throughput

0.458

High

202672

TXNL1
Thioredoxin-like protein 1

1

0

High-throughput

0.458

High

228231

PRKN
E3 ubiquitin-protein ligase parkin

1

0

High-throughput

0.458

High

237282

IF4E2
Eukaryotic translation initiation factor 4E type 2

1

0

High-throughput

0.458

High

272655

OFD1
Centriole and centriolar satellite protein OFD1

1

0

High-throughput

0.458

High

385267

NTRK1
High affinity nerve growth factor receptor

1

0

High-throughput

0.458

High

422071

LDHB
L-lactate dehydrogenase B chain

1

0

High-throughput

0.458

High

485080

GLI2
Zinc finger protein GLI2

1

0

High-throughput

0.458

High

516615

PABP1
Polyadenylate-binding protein 1

1

0

High-throughput

0.458

High

553322

RFA2
Replication protein A 32 kDa subunit

1

0

High-throughput

0.458

High

651830

RFA1
Replication protein A 70 kDa DNA-binding subunit

1

0

High-throughput

0.458

High

708346

TTK
Dual specificity protein kinase TTK

1

0

High-throughput

0.458

High

779827

CCNF
Cyclin-F

1

0

High-throughput

0.458

High

841828

CDK9
Cyclin-dependent kinase 9

1

0

High-throughput

0.458

High

849248

PSMD7
26S proteasome non-ATPase regulatory subunit 7

1

0

High-throughput

0.458

High

875170

TERA
Transitional endoplasmic reticulum ATPase

1

0

High-throughput

0.458

High

878215

SEC13
Protein SEC13 homolog

1

0

High-throughput

0.458

High

881242

CTBP2
C-terminal-binding protein 2

1

0

High-throughput

0.458

High

1049100

TRI14
Tripartite motif-containing protein 14

1

0

High-throughput

0.458

High

1053935

CAPR1
Caprin-1

1

0

High-throughput

0.458

High

1056095

NBR1
Next to BRCA1 gene 1 protein

1

0

High-throughput

0.458

High

1064542

U5S1
116 kDa U5 small nuclear ribonucleoprotein component

1

0

High-throughput

0.458

High

1068839

PCM1
Pericentriolar material 1 protein

1

0

High-throughput

0.458

High

1100900

MOONR
Protein moonraker

1

0

High-throughput

0.458

High

1119451

PAN2
PAN2-PAN3 deadenylation complex catalytic subunit PAN2

1

0

High-throughput

0.458

High

1129574

SMAG2
Protein Smaug homolog 2

1

0

High-throughput

0.458

High

1133284

RBM20
RNA-binding protein 20

1

0

High-throughput

0.458

High

1137830

CE350
Centrosome-associated protein 350

1

0

High-throughput

0.458

High

1138203

BRE1A
E3 ubiquitin-protein ligase BRE1A

1

0

High-throughput

0.458

High

1138490

ZN318
Zinc finger protein 318

1

0

High-throughput

0.458

High

1147733

HAUS3
HAUS augmin-like complex subunit 3

1

0

High-throughput

0.458

High

1159067

CEP85
Centrosomal protein of 85 kDa

1

0

High-throughput

0.458

High

1168805

MEX3B
RNA-binding protein MEX3B

1

0

High-throughput

0.458

High

1184238

MEPCE
7SK snRNA methylphosphate capping enzyme

1

0

High-throughput

0.458

High

1190383

HAUS6
HAUS augmin-like complex subunit 6

1

0

High-throughput

0.458

High

1199657

ZN598
E3 ubiquitin-protein ligase ZNF598

1

0

High-throughput

0.458

High

1200220

N4BP2
NEDD4-binding protein 2

1

0

High-throughput

0.458

High

1218161

CEP97
Centrosomal protein of 97 kDa

1

0

High-throughput

0.458

High

1218690

MGAP
MAX gene-associated protein

1

0

High-throughput

0.458

High

1234471

MACOI
Macoilin

1

0

High-throughput

0.458

High

1242091

LS14A
Protein LSM14 homolog A

1

0

High-throughput

0.458

High

1253978

ALMS1
Centrosome-associated protein ALMS1

1

0

High-throughput

0.458

High

1257148

DI3L1
DIS3-like exonuclease 1

1

0

High-throughput

0.458

High

1259773

SMAP2
Stromal membrane-associated protein 2

1

0

High-throughput

0.458

High

1267835

RENT1
Regulator of nonsense transcripts 1

1

0

High-throughput

0.458

High

1267837

DVL3
Segment polarity protein dishevelled homolog DVL-3

1

0

High-throughput

0.458

High

1267838

TTC17
Tetratricopeptide repeat protein 17

1

0

High-throughput

0.458

High

1267840

HAUS1
HAUS augmin-like complex subunit 1

1

0

High-throughput

0.458

High

1267843

FUBP3
Far upstream element-binding protein 3

1

0

High-throughput

0.458

High

1267851

MPP9
M-phase phosphoprotein 9

1

0

High-throughput

0.458

High

1267852

ATX2
Ataxin-2

1

0

High-throughput

0.458

High

1267854

HAUS7
HAUS augmin-like complex subunit 7

1

0

High-throughput

0.458

High

1267855

PAIP2
Polyadenylate-binding protein-interacting protein 2

1

0

High-throughput

0.458

High

1267856

LZTS2
Leucine zipper putative tumor suppressor 2

1

0

High-throughput

0.458

High

1267859

PCGF6
Polycomb group RING finger protein 6

1

0

High-throughput

0.458

High

1267864

MKRN2
E3 ubiquitin-protein ligase makorin-2

1

0

High-throughput

0.458

High

1267865

PAIP1
Polyadenylate-binding protein-interacting protein 1

1

0

High-throughput

0.458

High

1267866

GCP60
Golgi resident protein GCP60

1

0

High-throughput

0.458

High

1267868

HAUS4
HAUS augmin-like complex subunit 4

1

0

High-throughput

0.458

High

1267869

TDRD3
Tudor domain-containing protein 3

1

0

High-throughput

0.458

High

1267877

BIRC6
Baculoviral IAP repeat-containing protein 6

1

0

High-throughput

0.458

High

1267878

4ET
Eukaryotic translation initiation factor 4E transporter

1

0

High-throughput

0.458

High

1267879

ST7
Suppressor of tumorigenicity 7 protein

1

0

High-throughput

0.458

High

1267881

RAD18
E3 ubiquitin-protein ligase RAD18

1

0

High-throughput

0.458

High

1267882

SALL1
Sal-like protein 1

1

0

High-throughput

0.458

High

1267883

DIAP3
Protein diaphanous homolog 3

1

0

High-throughput

0.458

High

1267884

HAUS2
HAUS augmin-like complex subunit 2

1

0

High-throughput

0.458

High

1267885

F120C
Constitutive coactivator of PPAR-gamma-like protein 2

1

0

High-throughput

0.458

High

1267888

CEP72
Centrosomal protein of 72 kDa

1

0

High-throughput

0.458

High

1267890

HDC
Headcase protein homolog

1

0

High-throughput

0.458

High

1267892

ZRAN1
Ubiquitin thioesterase ZRANB1

1

0

High-throughput

0.458

High

1267893

TBK1
Serine/threonine-protein kinase TBK1

1

0

High-throughput

0.458

High

1267899

PKHG1
Pleckstrin homology domain-containing family G member 1

1

0

High-throughput

0.458

High

1267901

PSD13
26S proteasome non-ATPase regulatory subunit 13

1

0

High-throughput

0.458

High

1267902

CP131
Centrosomal protein of 131 kDa

1

0

High-throughput

0.458

High

1267903

SCAF8
SR-related and CTD-associated factor 8

1

0

High-throughput

0.458

High

1267907

RUVB2
RuvB-like 2

1

0

High-throughput

0.458

High

1267908

FBW1A
F-box/WD repeat-containing protein 1A

1

0

High-throughput

0.458

High

1267909

ADIP
Afadin- and alpha-actinin-binding protein

1

0

High-throughput

0.458

High

1267910

NINL
Ninein-like protein

1

0

High-throughput

0.458

High

1267912

MARF1
Meiosis regulator and mRNA stability factor 1

1

0

High-throughput

0.458

High

1267917

S23IP
SEC23-interacting protein

1

0

High-throughput

0.458

High

58827

T131L
Transmembrane protein 131-like

1

1

High-throughput

0.437

High

324856

M4K4
Mitogen-activated protein kinase kinase kinase kinase 4

1

3

High-throughput

0.437

High

1127661

PRC2B
Protein PRRC2B

1

2

High-throughput

0.437

High

1137937

RPRD2
Regulation of nuclear pre-mRNA domain-containing protein 2

1

1

High-throughput

0.437

High

1171046

TRI67
Tripartite motif-containing protein 67

1

1

High-throughput

0.437

High

1219800

ANKH1
Ankyrin repeat and KH domain-containing protein 1

1

1

High-throughput

0.437

High

1267862

UNK
RING finger protein unkempt homolog

1

6

High-throughput

0.437

High

1267867

PKHA4
Pleckstrin homology domain-containing family A member 4

1

1

High-throughput

0.437

High

1267876

ALG13
UDP-N-acetylglucosamine transferase subunit ALG13

1

1

High-throughput

0.437

High

497369

TAU
Microtubule-associated protein tau

1

0

High-throughput

0.426

High

1246415

INADL
InaD-like protein

1

0

High-throughput

0.426

High

448884

MMP7
Matrilysin

3

0

High-throughput

0.347

High

1232862

RIBC1
RIB43A-like with coiled-coils protein 1

2

0

High-throughput

0.328

High

1267857

TX13A
Testis-expressed protein 13A

2

0

High-throughput

0.328

High

1267915

PCDA3
Protocadherin alpha-3

2

0

High-throughput

0.328

High

1139850

OBI1
ORC ubiquitin ligase 1

2

0

Small-scale

0.325

High

1267889

WRP73
WD repeat-containing protein WRAP73

2

0

High-throughput

0.318

High

1058373

MESD
LRP chaperone MESD

2

0

High-throughput

0.316

High

1114277

AX2R
Annexin-2 receptor

1

0

High-throughput

0.279

Low

1150776

VASN
Vasorin

1

0

High-throughput

0.279

Low

1267846

FACOS
FANCD2 opposite strand protein

1

0

High-throughput

0.279

Low

196332

PJA2
E3 ubiquitin-protein ligase Praja-2

1

0

High-throughput

0.249

Low

721051

RFA3
Replication protein A 14 kDa subunit

1

0

High-throughput

0.249

Low

940649

F193A
Protein FAM193A

1

0

High-throughput

0.249

Low

1076347

JHD2C
Probable JmjC domain-containing histone demethylation protein 2C

1

0

High-throughput

0.249

Low

1093031

CSPP1
Centrosome and spindle pole-associated protein 1

1

0

High-throughput

0.249

Low

1164964

SAS6
Spindle assembly abnormal protein 6 homolog

1

0

High-throughput

0.249

Low

1240158

TTC13
Tetratricopeptide repeat protein 13

1

0

High-throughput

0.249

Low

1242034

RN214
RING finger protein 214

1

0

High-throughput

0.249

Low

1260065

CT55
Cancer/testis antigen 55

1

0

High-throughput

0.249

Low

1267831

K0232
Uncharacterized protein KIAA0232

1

0

High-throughput

0.249

Low

1267839

ENTR1
Endosome-associated-trafficking regulator 1

1

0

High-throughput

0.249

Low

1267841

NRBF2
Nuclear receptor-binding factor 2

1

0

High-throughput

0.249

Low

1267845

CC138
Coiled-coil domain-containing protein 138

1

0

High-throughput

0.249

Low

1267847

RN157
E3 ubiquitin ligase RNF157

1

0

Small-scale

0.249

Low

1267858

K1671
Uncharacterized protein KIAA1671

1

0

High-throughput

0.249

Low

1267875

Q9HCK3
KIAA1569 protein

1

0

High-throughput

0.249

Low

1267886

PSD3
PH and SEC7 domain-containing protein 3

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024