Protein: ELF3
Protein EARLY FLOWERING 3 (Nematode-responsive protein)

Gene: ELF3
Organism: Arabidopsis thaliana
Interactions: 48
UniProt ID: O82804

Gene Ontology (top 5):
GO:0000122 - negative regulation of transcription by RNA polymerase II
GO:0003700 - DNA-binding transcription factor activity
GO:0005634 - nucleus
GO:0005667 - transcription regulator complex
GO:0007623 - circadian rhythm

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

146356

ELF4
Protein EARLY FLOWERING 4

4

3

Small-scale

0.702

High

308531

COP1
E3 ubiquitin-protein ligase COP1

2

3

Small-scale

0.637

High

308527

PHYB
Phytochrome B

2

4

Small-scale

0.606

High

308561

PCL1
Transcription factor LUX

2

1

Small-scale

0.600

High

308542

PIF4
Transcription factor PIF4

1

1

Small-scale

0.573

High

308538

PCH1
Protein PHOTOPERIODIC CONTROL OF HYPOCOTYL 1

2

0

Small-scale

0.559

High

308552

APRR1
Two-component response regulator-like APRR1

1

1

Small-scale

0.552

High

90460

BBX19
B-box zinc finger protein 19

1

0

Small-scale

0.549

High

308562

GIGAN
Protein GIGANTEA

1

0

Small-scale

0.493

High

308526

PHYA
Phytochrome A

1

4

Small-scale

0.479

High

308528

PHYC
Phytochrome C

1

4

Small-scale

0.479

High

308529

PHYD
Phytochrome D

1

4

Small-scale

0.479

High

308530

PHYE
Phytochrome E

1

4

Small-scale

0.479

High

308536

PIF7
Transcription factor PIF7

1

1

Small-scale

0.479

High

308537

EF4L4
Protein ELF4-LIKE 4

1

3

Small-scale

0.479

High

308541

EF4L3
Protein ELF4-LIKE 3

1

3

Small-scale

0.479

High

308544

EF4L2
Protein ELF4-LIKE 2

1

3

Small-scale

0.479

High

308550

Q9LID3
non-specific serine/threonine protein kinase

1

3

Small-scale

0.479

High

308551

SPA3
Protein SPA1-RELATED 3

1

3

Small-scale

0.479

High

308554

PCLL
Transcription factor BOA

1

1

Small-scale

0.479

High

308565

SPA1
Protein SUPPRESSOR OF PHYA-105 1

1

3

Small-scale

0.479

High

308566

SPA2
Protein SPA1-RELATED 2

1

3

Small-scale

0.479

High

200914

GBLPA
Small ribosomal subunit protein RACK1z

1

0

Small-scale

0.458

High

308532

RD21A
Cysteine proteinase RD21A

1

0

Small-scale

0.458

High

308533

GL33
Germin-like protein subfamily 3 member 3

1

0

Small-scale

0.458

High

308545

TIC
Protein TIME FOR COFFEE

1

0

Small-scale

0.458

High

308546

Q9FIX7
Zinc knuckle

1

0

Small-scale

0.458

High

308553

LWD1
WD repeat-containing protein LWD1

1

0

Small-scale

0.458

High

308557

DSLE
Zinc finger BED domain-containing protein DAYSLEEPER

1

0

Small-scale

0.458

High

308558

CP41B
Chloroplast stem-loop binding protein of 41 kDa b, chloroplastic

1

0

Small-scale

0.458

High

200690

IAA16
Auxin-responsive protein IAA16

1

1

High-throughput

0.457

High

308535

IAA3
Auxin-responsive protein IAA3

1

1

High-throughput

0.457

High

308539

AHP5
Histidine-containing phosphotransfer protein 5

1

1

High-throughput

0.457

High

308540

ERF92
Ethylene-responsive transcription factor 1B

1

1

High-throughput

0.457

High

308555

AHP4
Histidine-containing phosphotransfer protein 4

1

1

High-throughput

0.457

High

308556

AFB2
Protein AUXIN SIGNALING F-BOX 2

1

1

High-throughput

0.457

High

308559

EBF1
EIN3-binding F-box protein 1

1

1

High-throughput

0.457

High

308567

ARR6
Two-component response regulator ARR6

1

1

High-throughput

0.457

High

308306

CRF1
Ethylene-responsive transcription factor CRF1

1

0

High-throughput

0.438

High

308543

ARFP
Auxin response factor 16

1

0

High-throughput

0.438

High

308549

AXR4
Protein AUXIN RESPONSE 4

1

0

High-throughput

0.438

High

308560

EIL1
ETHYLENE INSENSITIVE 3-like 1 protein

1

0

High-throughput

0.438

High

308564

NINJA
AFP homolog 2

1

0

High-throughput

0.438

High

101213

F4ISN5
non-specific serine/threonine protein kinase

1

3

Small-scale

0.437

High

308547

Q9FK52
non-specific serine/threonine protein kinase

1

3

Small-scale

0.437

High

308563

Q9SQR8
non-specific serine/threonine protein kinase

1

3

Small-scale

0.437

High

308548

FTIP1
FT-interacting protein 1

1

0

Small-scale

0.249

Low

308534

CTR1
Serine/threonine-protein kinase CTR1

1

0

High-throughput

0.238

Low


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Last updated: 11Aug2025