Protein: RED1
NURS complex subunit red1

Gene: RED1
Organism: Schizosaccharomyces pombe 972h-
Interactions: 224
UniProt ID: Q9UTR8

Gene Ontology (top 5):
GO:0000178 - exosome (RNase complex)
GO:0000785 - chromatin
GO:0005634 - nucleus
GO:0016604 - nuclear body
GO:0030674 - protein-macromolecule adaptor activity

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

143222

YE02
Uncharacterized helicase C17H9.02

5

4

Small-scale

0.918

High

252574

MMI1
RNA binding exosome specificity factor Mmi1

7

0

Small-scale

0.710

High

145301

YFPE
Uncharacterized protein C7D4.14c

6

0

Small-scale

0.696

High

145122

MTR4
ATP-dependent RNA helicase mtr4

1

4

Small-scale

0.691

High

1013743

PAP
Poly(A) polymerase pla1

4

1

Small-scale

0.691

High

293141

PIR2
NURS complex subunit pir2

4

0

Small-scale

0.665

High

1358011

YHP4
Uncharacterized RNA-binding protein C902.04

3

1

Small-scale

0.656

High

740427

DIS3
Exosome complex exonuclease dis3

3

0

Small-scale

0.628

High

223966

RRP42
Exosome complex component rrp42

2

5

Small-scale

0.611

High

1358074

BRR2
Pre-mRNA-splicing factor brr2

2

3

Small-scale

0.611

High

1013555

RRP6
Exosome complex exonuclease rrp6

2

1

Small-scale

0.601

High

548212

RPA1
DNA-directed RNA polymerase I subunit rpa1

2

0

Small-scale

0.585

High

1350876

RPA2
Probable DNA-directed RNA polymerase I subunit RPA2

2

0

Small-scale

0.585

High

145480

PAB2
Polyadenylate-binding protein 2

2

3

Small-scale

0.584

High

252090

YBJC
Zinc finger CCCH domain-containing protein C337.12

2

2

Small-scale

0.584

High

252222

CCR4
CCR4-Not complex 3'-5'-exoribonuclease subunit Ccr4

2

1

Small-scale

0.584

High

999827

RRP4
Exosome complex component rrp4

2

1

High-throughput

0.584

High

1350649

NCBP2
Nuclear cap-binding protein subunit 2

2

3

Small-scale

0.584

High

292969

SN114
Pre-mRNA-splicing factor cwf10

2

0

Small-scale

0.576

High

145211

NCBP1
Nuclear cap-binding protein subunit 1

2

0

Small-scale

0.559

High

252132

RRP5
rRNA biogenesis protein rrp5

2

3

Small-scale

0.558

High

251796

CFT1
Protein cft1

1

1

Small-scale

0.536

High

1000086

SPT6
Transcription elongation factor spt6

1

1

Small-scale

0.536

High

1358116

SEB1
Rpb7-binding protein seb1

1

0

Small-scale

0.513

High

840130

PLO1
Serine/threonine-protein kinase plo1

1

0

Small-scale

0.486

High

142007

PRP46
Pre-mRNA-splicing factor prp5

1

1

High-throughput

0.479

High

143358

RU17
U1 small nuclear ribonucleoprotein 70 kDa homolog

1

1

High-throughput

0.479

High

143445

NOT3
General negative regulator of transcription subunit 3

1

1

High-throughput

0.479

High

143979

YEC8
Uncharacterized WD repeat-containing protein C25H1.08c

1

2

High-throughput

0.479

High

144045

RFC3
Replication factor C subunit 3

1

3

High-throughput

0.479

High

144143

PRP19
Pre-mRNA-processing factor 19

1

1

High-throughput

0.479

High

144301

RPA49
DNA-directed RNA polymerase I subunit rpa49

1

1

High-throughput

0.479

High

145127

RNA14
mRNA 3'-end-processing protein rna14

1

4

High-throughput

0.479

High

145351

YE85
Uncharacterized WD repeat-containing protein C9G1.05

1

3

High-throughput

0.479

High

145412

YB7A
Uncharacterized AAA domain-containing protein C16E9.10c

1

1

High-throughput

0.479

High

193915

SMD1
Small nuclear ribonucleoprotein Sm D1

1

1

High-throughput

0.479

High

194786

RRP41
Exosome complex component ski6

1

7

High-throughput

0.479

High

194811

RRP46
Exosome complex component rrp46

1

4

High-throughput

0.479

High

194936

DHX15
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43

1

2

High-throughput

0.479

High

195001

LSM5
U6 snRNA-associated Sm-like protein LSm5

1

3

High-throughput

0.479

High

195201

PRP17
Pre-mRNA-processing factor 17

1

3

High-throughput

0.479

High

223543

RUXF
Small nuclear ribonucleoprotein F

1

1

High-throughput

0.479

High

223717

SLT11
Pre-mRNA-splicing factor cwf5

1

1

High-throughput

0.479

High

223742

CSL4
Exosome complex component csl4

1

3

High-throughput

0.479

High

251189

WAT1
Target of rapamycin complex subunit wat1

1

2

High-throughput

0.479

High

251511

PEF1
Serine/threonine-protein kinase pef1

1

1

High-throughput

0.479

High

251552

YQC7
Exosome complex protein C1739.07

1

1

High-throughput

0.479

High

251602

LSM7
U6 snRNA-associated Sm-like protein LSm7

1

2

High-throughput

0.479

High

252323

RRP45
Exosome complex component rrp45

1

5

High-throughput

0.479

High

252604

RUXG
Small nuclear ribonucleoprotein G

1

3

High-throughput

0.479

High

292875

CSK2C
Casein kinase II subunit beta-2

1

1

High-throughput

0.479

High

293276

REXO4
RNA exonuclease 4

1

1

High-throughput

0.479

High

293430

RFC4
Replication factor C subunit 4

1

3

High-throughput

0.479

High

293557

NOP56
Nucleolar protein 56

1

2

High-throughput

0.479

High

293579

POB3
FACT complex subunit pob3

1

1

High-throughput

0.479

High

293859

RPAC1
DNA-directed RNA polymerases I and III subunit RPAC1

1

1

High-throughput

0.479

High

293872

CWF17
Pre-mRNA-splicing factor cwf17

1

1

High-throughput

0.479

High

294013

RUVB2
RuvB-like helicase 2

1

1

High-throughput

0.479

High

294019

RFC5
Replication factor C subunit 5

1

3

High-throughput

0.479

High

383480

CDK1
Cyclin-dependent kinase 1

1

1

High-throughput

0.479

High

448933

H4
Histone H4

1

1

High-throughput

0.479

High

532296

PP11
Serine/threonine-protein phosphatase PP1-1

1

1

High-throughput

0.479

High

660088

SPI1
GTP-binding nuclear protein spi1

1

1

High-throughput

0.479

High

741624

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

1

High-throughput

0.479

High

765734

CEF1
Pre-mRNA-splicing factor cdc5

1

2

High-throughput

0.479

High

771125

CSK2A
Casein kinase II subunit alpha

1

2

High-throughput

0.479

High

771130

CSK2B
Casein kinase II subunit beta

1

1

High-throughput

0.479

High

953345

RPB11
DNA-directed RNA polymerase II subunit RPB11

1

1

High-throughput

0.479

High

953385

CWC2
Pre-mRNA-splicing factor cwf2

1

1

High-throughput

0.479

High

953494

NOT2
General negative regulator of transcription subunit 2

1

1

High-throughput

0.479

High

953587

CLF1
Pre-mRNA-splicing factor cwf4

1

3

High-throughput

0.479

High

997983

RNP24
RNA-binding protein rnp24

1

1

High-throughput

0.479

High

998455

MLO3
mRNA export protein mlo3

1

1

High-throughput

0.479

High

1000005

RFC2
Replication factor C subunit 2

1

3

High-throughput

0.479

High

1013612

RSMB
Small nuclear ribonucleoprotein-associated protein B

1

2

High-throughput

0.479

High

1013674

RRP43
Exosome complex component rrp43

1

5

High-throughput

0.479

High

1185662

RU2B
Probable U2 small nuclear ribonucleoprotein B''

1

2

High-throughput

0.479

High

1319471

RUVB1
RuvB-like helicase 1

1

1

High-throughput

0.479

High

1336844

TCG1
Single-stranded TG1-3 DNA-binding protein

1

1

High-throughput

0.479

High

1350659

CDC48
Cell division cycle protein 48

1

1

High-throughput

0.479

High

1350683

YLA3
Uncharacterized HTH La-type RNA-binding protein C1527.03

1

2

High-throughput

0.479

High

1350768

NHP2
H/ACA ribonucleoprotein complex subunit nhp2

1

1

High-throughput

0.479

High

1350786

REXO3
RNA exonuclease 3

1

1

High-throughput

0.479

High

1350838

MTR3
Exosome complex component mtr3

1

7

High-throughput

0.479

High

1350847

SYF1
Pre-mRNA-splicing factor cwf3

1

3

High-throughput

0.479

High

1350856

NOP58
Nucleolar protein 58

1

2

High-throughput

0.479

High

1357973

YTM1
Ribosome biogenesis protein ytm1

1

1

High-throughput

0.479

High

1358051

RU2A
U2 small nuclear ribonucleoprotein A'

1

2

High-throughput

0.479

High

1358099

YIPC
Uncharacterized WD repeat-containing protein C343.04c

1

3

High-throughput

0.479

High

1358132

RAD50
DNA repair protein rad50

1

1

High-throughput

0.479

High

1358162

RSE1
Pre-mRNA-splicing factor prp12

1

1

High-throughput

0.479

High

1358164

SMD3
Small nuclear ribonucleoprotein Sm D3

1

2

High-throughput

0.479

High

1358161

RED1
NURS complex subunit red1

1

0

Small-scale

0.460

High

102114

ERH
Enhancer of rudimentary homolog 1

1

0

Small-scale

0.458

High

140999

DED1
ATP-dependent RNA helicase ded1

1

0

High-throughput

0.458

High

142900

SSR1
SWI/SNF and RSC complexes subunit ssr1

1

0

High-throughput

0.458

High

143263

EBP2
Probable rRNA-processing protein ebp2

1

0

High-throughput

0.458

High

143415

POZ1
Protection of telomeres protein poz1

1

0

High-throughput

0.458

High

143433

IMB1
Importin subunit beta-1

1

0

High-throughput

0.458

High

143503

SA114
Pre-mRNA-splicing factor sap114

1

0

High-throughput

0.458

High

143509

RRP40
Exosome complex component rrp40

1

0

High-throughput

0.458

High

144035

OLA1
Obg-like ATPase 1

1

0

High-throughput

0.458

High

144216

SMD2
Small nuclear ribonucleoprotein Sm D2

1

0

High-throughput

0.458

High

144248

UTP21
U3 small nucleolar RNA-associated protein 21 homolog

1

0

High-throughput

0.458

High

144282

YEAB
Uncharacterized protein UNK4.11c

1

0

High-throughput

0.458

High

144839

NTPPA
dTTP/UTP pyrophosphatase

1

0

High-throughput

0.458

High

144936

PRP40
Pre-mRNA-processing protein prp40

1

0

High-throughput

0.458

High

193867

YF98
HMG box-containing protein C10F6.08c

1

0

High-throughput

0.458

High

194847

OGA1
Ribosome-associated protein oga1

1

0

High-throughput

0.458

High

195067

DEF1
RNA polymerase II degradation factor 1

1

0

High-throughput

0.458

High

223493

CLR6
Histone deacetylase clr6

1

0

High-throughput

0.458

High

223519

YBH8
Uncharacterized protein C3B8.8

1

0

High-throughput

0.458

High

223700

YCO6
Putative nucleosome assembly protein C364.06

1

0

High-throughput

0.458

High

223727

VGL1
Vigilin 1

1

0

High-throughput

0.458

High

251370

ISY1
Pre-mRNA-splicing factor cwf12

1

0

High-throughput

0.458

High

251450

MU174
Meiotically up-regulated gene 174 protein

1

0

High-throughput

0.458

High

251981

YJ03
UPF0400 protein C337.03

1

0

High-throughput

0.458

High

252192

CAF1
Poly(A) ribonuclease pop2

1

0

High-throughput

0.458

High

252298

BCD1
Putative box C/D snoRNA protein SPCC613.07

1

0

High-throughput

0.458

High

252532

CBF11
Transcription factor cbf11

1

0

High-throughput

0.458

High

292925

YH56
UPF0743 protein C215.06c

1

0

High-throughput

0.458

High

293269

IMA2
Importin subunit alpha-2

1

0

High-throughput

0.458

High

293292

ELY5
Uncharacterized protein ely5

1

0

High-throughput

0.458

High

293625

APC8
Anaphase-promoting complex subunit 8

1

0

High-throughput

0.458

High

294039

RPA12
DNA-directed RNA polymerase I subunit RPA12

1

0

High-throughput

0.458

High

391998

H2A1
Histone H2A-alpha

1

0

High-throughput

0.458

High

500287

CG23
G2/mitotic-specific cyclin cdc13

1

0

High-throughput

0.458

High

514126

YPT1
GTP-binding protein ypt1

1

0

High-throughput

0.458

High

675872

P25
P25 protein

1

0

High-throughput

0.458

High

703536

GAP1
GTPase-activating protein

1

0

High-throughput

0.458

High

724313

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

0

High-throughput

0.458

High

737072

STE11
Transcription factor ste11

1

0

High-throughput

0.458

High

777115

SAP1
Switch-activating protein 1

1

0

High-throughput

0.458

High

783430

RNA1
Ran GTPase-activating protein 1

1

0

High-throughput

0.458

High

945050

YHZ8
Uncharacterized protein C21B10.08c

1

0

High-throughput

0.458

High

953328

NOT1
General negative regulator of transcription subunit 1

1

0

High-throughput

0.458

High

953332

NAT10
RNA cytidine acetyltransferase

1

0

High-throughput

0.458

High

953456

DPB4
DNA polymerase epsilon subunit D

1

0

High-throughput

0.458

High

989569

GAR1
H/ACA ribonucleoprotein complex subunit gar1

1

0

High-throughput

0.458

High

998260

CDB4
Curved DNA-binding protein

1

0

High-throughput

0.458

High

998271

RPAB1
DNA-directed RNA polymerases I, II, and III subunit RPABC1

1

0

High-throughput

0.458

High

999869

YB64
Uncharacterized protein C12C2.04

1

0

High-throughput

0.458

High

999914

KRI1
Protein kri1

1

0

High-throughput

0.458

High

999934

TGS1
Trimethylguanosine synthase

1

0

High-throughput

0.458

High

999939

YAC4
Putative general negative regulator of transcription C16C9.04c

1

0

High-throughput

0.458

High

1000007

US108
U1 snRNP-associated protein usp108

1

0

High-throughput

0.458

High

1000047

PRP45
Pre-mRNA-processing protein 45

1

0

High-throughput

0.458

High

1000054

HOG1
Mitogen-activated protein kinase sty1

1

0

High-throughput

0.458

High

1000082

RHO1
GTP-binding protein rho1

1

0

High-throughput

0.458

High

1000089

HAS1
ATP-dependent RNA helicase has1

1

0

High-throughput

0.458

High

1000101

PCR1
Transcription factor pcr1

1

0

High-throughput

0.458

High

1013479

UTP11
Probable U3 small nucleolar RNA-associated protein 11

1

0

High-throughput

0.458

High

1013519

YAQD
Uncharacterized protein C18G6.13

1

0

High-throughput

0.458

High

1013633

SF3B1
U2 snRNP component prp10

1

0

High-throughput

0.458

High

1013744

CLP1
mRNA cleavage and polyadenylation factor clp1

1

0

High-throughput

0.458

High

1013808

TCTP
Translationally-controlled tumor protein homolog

1

0

High-throughput

0.458

High

1246700

AES1
Antisense-enhancing sequence 1

1

0

High-throughput

0.458

High

1265811

RCD1
Cell differentiation protein rcd1

1

0

High-throughput

0.458

High

1265828

RPAB3
DNA-directed RNA polymerases I, II, and III subunit RPABC3

1

0

High-throughput

0.458

High

1350681

MUG14
Meiotically up-regulated gene 14 protein

1

0

High-throughput

0.458

High

1350734

RU1C
U1 small nuclear ribonucleoprotein C

1

0

High-throughput

0.458

High

1358002

LUC7
U1 snRNP-associated protein usp106

1

0

High-throughput

0.458

High

1358022

YOA2
Uncharacterized protein C557.02c

1

0

High-throughput

0.458

High

1358040

SPF27
Pre-mRNA-splicing factor cwf7

1

0

High-throughput

0.458

High

1358058

RUXE
Small nuclear ribonucleoprotein E

1

0

High-throughput

0.458

High

1358059

RPA34
DNA-directed RNA polymerase I subunit rpa34

1

0

High-throughput

0.458

High

1358120

MAK16
Protein mak16

1

0

High-throughput

0.458

High

1358128

FUB1
Silencing boundary-establishment protein FUB1-like protein

1

0

High-throughput

0.458

High

1358137

YKR3
G-patch domain-containing protein C1486.03

1

0

High-throughput

0.458

High

1358152

PFS2
Polyadenylation factor subunit 2

1

0

High-throughput

0.458

High

1358158

ARP9
SWI/SNF and RSC complexes subunit arp9

1

0

High-throughput

0.458

High

1358163

CWF18
Pre-mRNA-splicing factor cwf18

1

0

High-throughput

0.458

High

1358165

RPF2
Ribosome production factor 2 homolog

1

0

High-throughput

0.458

High

1358166

SA145
Pre-mRNA-splicing factor sap145

1

0

High-throughput

0.458

High

1358168

RP13A
Proteasomal ubiquitin receptor ADRM1 homolog rpn1301

1

0

High-throughput

0.458

High

1358170

MED4
Mediator of RNA polymerase II transcription subunit 4

1

0

High-throughput

0.458

High

251758

SNU13
13 kDa ribonucleoprotein-associated protein

1

1

High-throughput

0.437

High

252615

PRP39
Pre-mRNA-processing factor 39

1

3

High-throughput

0.437

High

252626

YQL5
Uncharacterized RNA-binding protein C1827.05c

1

1

High-throughput

0.437

High

293533

CWF11
Pre-mRNA-splicing factor cwf11

1

2

High-throughput

0.437

High

998255

RPAC2
DNA-directed RNA polymerases I and III subunit RPAC2

1

1

High-throughput

0.437

High

999758

NRD1
Negative regulator of differentiation 1

1

1

High-throughput

0.437

High

999949

CDC15
Cell division control protein 15

1

1

High-throughput

0.437

High

1015730

2ABA
Protein phosphatase PP2A regulatory subunit B

1

1

High-throughput

0.437

High

1350679

UTP7
Probable U3 small nucleolar RNA-associated protein 7

1

2

High-throughput

0.437

High

1350732

YN8B
ZZ-type zinc finger-containing protein P35G2.11c

1

1

High-throughput

0.437

High

1350863

YIW2
Uncharacterized helicase C694.02

1

4

High-throughput

0.437

High

1358031

YHHB
HMG box-containing protein C28F2.11

1

1

High-throughput

0.437

High

1358169

CWC25
Pre-mRNA-splicing factor cwf25

1

0

Small-scale

0.279

Low

142735

TFB1
General transcription and DNA repair factor IIH subunit tfb1

1

0

High-throughput

0.249

Low

142942

SLT1
Protein slt1

1

0

High-throughput

0.249

Low

143286

YE0C
Uncharacterized FAD-binding protein C17H9.12c

1

0

High-throughput

0.249

Low

144019

YEG7
Uncharacterized protein C26H5.07c

1

0

High-throughput

0.249

Low

144056

CBF5
H/ACA ribonucleoprotein complex subunit cbf5

1

0

High-throughput

0.249

Low

144968

SPP42
Pre-mRNA-splicing factor spp42

1

0

High-throughput

0.249

Low

145401

CUE5
CUE domain-containing protein 5

1

0

High-throughput

0.249

Low

194944

YBPC
Uncharacterized protein C16H5.12c

1

0

High-throughput

0.249

Low

194949

MBX1
MADS-box transcription factor 1

1

0

High-throughput

0.249

Low

223534

SYF2
Pre-mRNA-splicing factor syf2

1

0

High-throughput

0.249

Low

251901

CWF14
Pre-mRNA-splicing factor cwf14

1

0

High-throughput

0.249

Low

292794

YJ14
UPF0300 protein C737.04

1

0

High-throughput

0.249

Low

292818

G3BP
Putative G3BP-like protein

1

0

High-throughput

0.249

Low

293617

PHB2
Prohibitin-2

1

0

High-throughput

0.249

Low

293922

NOG1
Probable nucleolar GTP-binding protein 1

1

0

High-throughput

0.249

Low

815116

IF4A
ATP-dependent RNA helicase eIF4A

1

0

High-throughput

0.249

Low

864206

RTN1
Reticulon-like protein 1

1

0

High-throughput

0.249

Low

953446

DPOE
DNA polymerase epsilon catalytic subunit A

1

0

High-throughput

0.249

Low

1000033

YAG7
Uncharacterized protein C12G12.07c

1

0

High-throughput

0.249

Low

1013448

YAM3
Putative oxidoreductase C1F5.03c

1

0

High-throughput

0.249

Low

1013669

DBP3
ATP-dependent RNA helicase dbp3

1

0

High-throughput

0.249

Low

1013774

YD72
Uncharacterized protein C32A11.02c

1

0

High-throughput

0.249

Low

1257356

OST3
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 3

1

0

High-throughput

0.249

Low

1319459

YOM2
Uncharacterized protein PB7E8.02

1

0

High-throughput

0.249

Low

1319472

YKM7
Uncharacterized protein PB24D3.07c

1

0

High-throughput

0.249

Low

1336855

YL92
Uncharacterized protein C683.02c

1

0

High-throughput

0.249

Low

1350664

YIL5
Uncharacterized protein C1565.05

1

0

High-throughput

0.249

Low

1350678

YLI2
Uncharacterized protein C458.02c

1

0

High-throughput

0.249

Low

1350686

ARC1
tRNA-aminoacylation cofactor arc1

1

0

High-throughput

0.249

Low

1350710

YOH7
Uncharacterized protein C13E7.07

1

0

High-throughput

0.249

Low

1350718

YNY8
Uncharacterized protein C1711.08

1

0

High-throughput

0.249

Low

1350829

NOP10
H/ACA ribonucleoprotein complex subunit nop10

1

0

High-throughput

0.249

Low

1358079

RL1DB
Putative ribosome biogenesis protein C8F11.04

1

0

High-throughput

0.249

Low

1358167

MUG72
Meiotically up-regulated gene 72 protein

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024