Protein: NIP7
60S ribosome subunit biogenesis protein NIP7 homolog (KD93) (Nucleolar pre-rRNA processing protein NIP7)

Gene: NIP7
Organism: Homo sapiens
Interactions: 163
UniProt ID: Q9Y221

Gene Ontology (top 5):
GO:0003723 - RNA binding
GO:0005654 - nucleoplasm
GO:0005730 - nucleolus
GO:0005829 - cytosol
GO:0030687 - preribosome, large subunit precursor

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

802271

NOP2
Probable 28S rRNA

3

2

High-throughput

0.867

High

1376966

NIP7
60S ribosome subunit biogenesis protein NIP7 homolog

1

0

High-throughput

0.663

High

943026

SRPK2
SRSF protein kinase 2

2

2

High-throughput

0.628

High

418803

NPM
Nucleophosmin

2

1

High-throughput

0.611

High

818620

SOX2
Transcription factor SOX-2

2

1

High-throughput

0.611

High

916971

RS6
Small ribosomal subunit protein eS6

2

1

High-throughput

0.611

High

1065910

RRS1
Ribosome biogenesis regulatory protein homolog

2

1

High-throughput

0.611

High

900319

RL37A
Large ribosomal subunit protein eL43

2

0

High-throughput

0.602

High

914852

CNBP
CCHC-type zinc finger nucleic acid binding protein

2

0

High-throughput

0.602

High

922023

RL30
Large ribosomal subunit protein eL30

2

0

High-throughput

0.602

High

1187861

ZCCHV
Zinc finger CCCH-type antiviral protein 1

2

0

High-throughput

0.602

High

649829

RL10
Large ribosomal subunit protein uL16

2

0

High-throughput

0.585

High

1308807

RBM4B
RNA-binding protein 4B

2

0

High-throughput

0.585

High

1310224

LZTS2
Leucine zipper putative tumor suppressor 2

1

1

High-throughput

0.573

High

370736

ESR1
Estrogen receptor

2

1

High-throughput

0.571

High

1326378

DDX24
ATP-dependent RNA helicase DDX24

1

2

Small-scale

0.561

High

1343807

ANLN
Anillin

2

0

High-throughput

0.559

High

171862

WDR46
WD repeat-containing protein 46

1

1

High-throughput

0.536

High

269940

PRKRA
Interferon-inducible double-stranded RNA-dependent protein kinase activator A

1

4

High-throughput

0.536

High

271455

NPM3
Nucleoplasmin-3

1

1

High-throughput

0.536

High

278891

DNJC8
DnaJ homolog subfamily C member 8

1

1

High-throughput

0.536

High

281471

RL1D1
Ribosomal L1 domain-containing protein 1

1

2

High-throughput

0.536

High

401184

RLA0
Large ribosomal subunit protein uL10

1

2

High-throughput

0.536

High

489347

H14
Histone H1.4

1

1

High-throughput

0.536

High

560015

H12
Histone H1.2

1

1

High-throughput

0.536

High

736813

RL4
Large ribosomal subunit protein uL4

1

1

High-throughput

0.536

High

913841

RL7A
Large ribosomal subunit protein eL8

1

1

High-throughput

0.536

High

922759

RL10A
Large ribosomal subunit protein uL1

1

2

High-throughput

0.536

High

944994

RED1
Double-stranded RNA-specific editase 1

1

2

High-throughput

0.536

High

952180

SRSF3
Serine/arginine-rich splicing factor 3

1

3

High-throughput

0.536

High

962465

HNRPU
Heterogeneous nuclear ribonucleoprotein U

1

1

High-throughput

0.536

High

1020007

ILF3
Interleukin enhancer-binding factor 3

1

3

High-throughput

0.536

High

1028877

SRSF5
Serine/arginine-rich splicing factor 5

1

2

High-throughput

0.536

High

1029164

SRSF6
Serine/arginine-rich splicing factor 6

1

4

High-throughput

0.536

High

1316938

MK67I
MKI67 FHA domain-interacting nucleolar phosphoprotein

1

1

High-throughput

0.536

High

1334607

LN28A
Protein lin-28 homolog A

1

1

High-throughput

0.536

High

1343270

TF7L2
Transcription factor 7-like 2

1

1

High-throughput

0.536

High

1347055

RBM28
RNA-binding protein 28

1

1

High-throughput

0.536

High

1349697

H2AW
Core histone macro-H2A.2

1

2

High-throughput

0.536

High

197861

CRX
Cone-rod homeobox protein

1

1

High-throughput

0.523

High

330605

ZBED1
E3 SUMO-protein ligase ZBED1

1

0

High-throughput

0.518

High

1287436

OPTN
Optineurin

1

1

High-throughput

0.515

High

133733

NOP56
Nucleolar protein 56

1

0

High-throughput

0.513

High

321255

PTBP3
Polypyrimidine tract-binding protein 3

1

0

High-throughput

0.513

High

396068

A4
Amyloid-beta precursor protein

1

0

High-throughput

0.513

High

595474

LMNB1
Lamin-B1

1

0

High-throughput

0.513

High

642682

RL13
Large ribosomal subunit protein eL13

1

0

High-throughput

0.513

High

739878

SRP14
Signal recognition particle 14 kDa protein

1

0

High-throughput

0.513

High

806739

RL28
Large ribosomal subunit protein eL28

1

0

High-throughput

0.513

High

842726

RL14
Large ribosomal subunit protein eL14

1

0

High-throughput

0.513

High

899411

RL15
Large ribosomal subunit protein eL15

1

0

High-throughput

0.513

High

908218

RS16
Small ribosomal subunit protein uS9

1

0

High-throughput

0.513

High

923284

RL11
Large ribosomal subunit protein uL5

1

0

High-throughput

0.513

High

923595

RL8
Large ribosomal subunit protein uL2

1

0

High-throughput

0.513

High

971636

RL18A
Large ribosomal subunit protein eL20

1

0

High-throughput

0.513

High

1040735

KRR1
KRR1 small subunit processome component homolog

1

0

High-throughput

0.513

High

1047474

PEBB
Core-binding factor subunit beta

1

0

High-throughput

0.513

High

1076145

OASL
2'-5'-oligoadenylate synthase-like protein

1

0

High-throughput

0.513

High

1264695

DGCR8
Microprocessor complex subunit DGCR8

1

0

High-throughput

0.513

High

1291239

NEIL1
Endonuclease 8-like 1

1

0

High-throughput

0.513

High

1295985

ZC3HA
Zinc finger CCCH domain-containing protein 10

1

0

High-throughput

0.513

High

1309674

MBB1A
Myb-binding protein 1A

1

0

High-throughput

0.513

High

1326285

REXO4
RNA exonuclease 4

1

0

High-throughput

0.513

High

1344176

DDX21
Nucleolar RNA helicase 2

1

0

High-throughput

0.513

High

1345143

ABC3C
DNA dC->dU-editing enzyme APOBEC-3C

1

0

High-throughput

0.513

High

1347799

LYAR
Cell growth-regulating nucleolar protein

1

0

High-throughput

0.513

High

1356066

PURG
Purine-rich element-binding protein gamma

1

0

High-throughput

0.513

High

1356747

ZN346
Zinc finger protein 346

1

0

High-throughput

0.513

High

1357091

ABT1
Activator of basal transcription 1

1

0

High-throughput

0.513

High

1357693

PHF8
Histone lysine demethylase PHF8

1

0

High-throughput

0.513

High

1376967

RL36
Large ribosomal subunit protein eL36

1

0

High-throughput

0.513

High

1176200

NOL8
Nucleolar protein 8

1

0

Small-scale

0.504

High

663995

PTN4
Tyrosine-protein phosphatase non-receptor type 4

1

0

High-throughput

0.493

High

470612

H2A1
Histone H2A type 1

1

1

High-throughput

0.489

High

1357639

SRPK3
SRSF protein kinase 3

1

2

High-throughput

0.489

High

309167

KI20A
Kinesin-like protein KIF20A

1

2

High-throughput

0.479

High

315449

NSA2
Ribosome biogenesis protein NSA2 homolog

1

1

High-throughput

0.479

High

323324

STAU1
Double-stranded RNA-binding protein Staufen homolog 1

1

4

High-throughput

0.479

High

738133

PP1G
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit

1

1

High-throughput

0.479

High

935385

H31
Histone H3.1

1

1

High-throughput

0.479

High

952708

H33
Histone H3.3

1

1

High-throughput

0.479

High

970074

KIF23
Kinesin-like protein KIF23

1

1

High-throughput

0.479

High

1018121

GRSF1
G-rich sequence factor 1

1

1

High-throughput

0.479

High

1019694

ILF2
Interleukin enhancer-binding factor 2

1

1

High-throughput

0.479

High

1064848

U5S1
116 kDa U5 small nuclear ribonucleoprotein component

1

1

High-throughput

0.479

High

1128561

HABP4
Intracellular hyaluronan-binding protein 4

1

1

High-throughput

0.479

High

1136361

RC3H1
Roquin-1

1

1

High-throughput

0.479

High

1241072

SERB1
SERPINE1 mRNA-binding protein 1

1

1

High-throughput

0.479

High

1259539

NOC3L
Nucleolar complex protein 3 homolog

1

3

High-throughput

0.479

High

1264214

DNJC9
DnaJ homolog subfamily C member 9

1

1

High-throughput

0.479

High

1269955

ESR2
Estrogen receptor beta

1

1

High-throughput

0.479

High

1270991

KAT6A
Histone acetyltransferase KAT6A

1

1

High-throughput

0.479

High

1286756

CHM4C
Charged multivesicular body protein 4c

1

1

High-throughput

0.479

High

1330563

CHM4B
Charged multivesicular body protein 4b

1

1

High-throughput

0.479

High

1335239

RC3H2
Roquin-2

1

1

High-throughput

0.479

High

278569

SPF27
Pre-mRNA-splicing factor SPF27

1

0

High-throughput

0.460

High

833994

CLK2
Dual specificity protein kinase CLK2

1

0

High-throughput

0.460

High

1127730

PRC2B
Protein PRRC2B

1

0

High-throughput

0.460

High

1235833

CPSF7
Cleavage and polyadenylation specificity factor subunit 7

1

0

High-throughput

0.460

High

1274281

RBPMS
RNA-binding protein with multiple splicing

1

0

High-throughput

0.460

High

1281482

FBXW7
F-box/WD repeat-containing protein 7

1

0

High-throughput

0.460

High

1299709

QKI
KH domain-containing RNA-binding protein QKI

1

0

High-throughput

0.460

High

123104

MEN1
Menin

1

0

High-throughput

0.458

High

149433

CTRO
Citron Rho-interacting kinase

1

0

High-throughput

0.458

High

182957

R113A
E3 ubiquitin-protein ligase RNF113A

1

0

High-throughput

0.458

High

210376

PRC1
Protein regulator of cytokinesis 1

1

0

High-throughput

0.458

High

233693

NUPR1
Nuclear protein 1

1

0

High-throughput

0.458

High

258251

DNJB6
DnaJ homolog subfamily B member 6

1

0

High-throughput

0.458

High

348264

MYC
Myc proto-oncogene protein

1

0

High-throughput

0.458

High

428503

TBB5
Tubulin beta chain

1

0

High-throughput

0.458

High

442599

RU17
U1 small nuclear ribonucleoprotein 70 kDa

1

0

High-throughput

0.458

High

554079

RFA2
Replication protein A 32 kDa subunit

1

0

High-throughput

0.458

High

603791

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

0

High-throughput

0.458

High

652631

RFA1
Replication protein A 70 kDa DNA-binding subunit

1

0

High-throughput

0.458

High

721804

RFA3
Replication protein A 14 kDa subunit

1

0

High-throughput

0.458

High

722554

RL22
Large ribosomal subunit protein eL22

1

0

High-throughput

0.458

High

750543

COIL
Coilin

1

0

High-throughput

0.458

High

760393

RL3
Large ribosomal subunit protein uL3

1

0

High-throughput

0.458

High

824542

NR2C2
Nuclear receptor subfamily 2 group C member 2

1

0

High-throughput

0.458

High

877955

FOXA1
Hepatocyte nuclear factor 3-alpha

1

0

High-throughput

0.458

High

909340

UBE2H
Ubiquitin-conjugating enzyme E2 H

1

0

High-throughput

0.458

High

914469

RB11A
Ras-related protein Rab-11A

1

0

High-throughput

0.458

High

918155

H4
Histone H4

1

0

High-throughput

0.458

High

1030032

TIF1B
Transcription intermediary factor 1-beta

1

0

High-throughput

0.458

High

1066890

KIF14
Kinesin-like protein KIF14

1

0

High-throughput

0.458

High

1119673

MIDN
Midnolin

1

0

High-throughput

0.458

High

1153979

IFIX
Pyrin and HIN domain-containing protein 1

1

0

High-throughput

0.458

High

1201771

ZCH18
Zinc finger CCCH domain-containing protein 18

1

0

High-throughput

0.458

High

1235711

ZBTB2
Zinc finger and BTB domain-containing protein 2

1

0

High-throughput

0.458

High

1236581

SIR6
NAD-dependent protein deacylase sirtuin-6

1

0

High-throughput

0.458

High

1251082

SNIP1
Smad nuclear-interacting protein 1

1

0

High-throughput

0.458

High

1256487

DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific

1

0

High-throughput

0.458

High

1285790

CHCH1
Small ribosomal subunit protein mS37

1

0

High-throughput

0.458

High

1286494

DCPS
m7GpppX diphosphatase

1

0

High-throughput

0.458

High

1294140

DDRGK
DDRGK domain-containing protein 1

1

0

High-throughput

0.458

High

1311845

THAP7
THAP domain-containing protein 7

1

0

High-throughput

0.458

High

1333817

ECT2
Protein ECT2

1

0

High-throughput

0.458

High

1347464

AKIP
Small ribosomal subunit protein mS38

1

0

High-throughput

0.458

High

1350127

UBP36
Ubiquitin carboxyl-terminal hydrolase 36

1

0

High-throughput

0.458

High

1057727

RRP1B
Ribosomal RNA processing protein 1 homolog B

1

1

High-throughput

0.445

High

391974

H2A1B
Histone H2A type 1-B/E

1

1

High-throughput

0.437

High

306359

GBRAP
Gamma-aminobutyric acid receptor-associated protein

1

0

High-throughput

0.426

High

967098

XPC
DNA repair protein complementing XP-C cells

1

0

High-throughput

0.426

High

1221502

ZC3H3
Zinc finger CCCH domain-containing protein 3

2

0

High-throughput

0.318

High

1191805

NECA2
N-terminal EF-hand calcium-binding protein 2

1

0

High-throughput

0.299

High

180511

MAGB2
Melanoma-associated antigen B2

1

0

High-throughput

0.279

Low

615499

KALM
Anosmin-1

1

0

High-throughput

0.279

Low

950746

ARF5
ADP-ribosylation factor 5

1

0

High-throughput

0.279

Low

1048390

SCRB2
Lysosome membrane protein 2

1

0

High-throughput

0.279

Low

1101031

RN151
RING finger protein 151

1

0

High-throughput

0.279

Low

1201082

PNM8A
Paraneoplastic antigen-like protein 8A

1

0

High-throughput

0.279

Low

1295876

ZN668
Zinc finger protein 668

1

0

High-throughput

0.279

Low

1298289

ZNF48
Zinc finger protein 48

1

0

High-throughput

0.279

Low

1343438

HINT3
Adenosine 5'-monophosphoramidase HINT3

1

0

High-throughput

0.279

Low

1349982

NHSL3
NHS-like protein 3

1

0

High-throughput

0.279

Low

1354654

ZBT47
Zinc finger and BTB domain-containing protein 47

1

0

High-throughput

0.279

Low

1297729

DMRTB
Doublesex- and mab-3-related transcription factor B1

1

0

High-throughput

0.251

Low

169670

BET1
BET1 homolog

1

0

High-throughput

0.249

Low

726477

BASI
Basigin

1

0

High-throughput

0.249

Low

839848

LHX2
LIM/homeobox protein Lhx2

1

0

High-throughput

0.249

Low

1172309

TRI67
Tripartite motif-containing protein 67

1

0

High-throughput

0.249

Low

1293526

PRR11
Proline-rich protein 11

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024