HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
751311	RFC1 Replication factor C subunit 1	2	6	High-throughput	0.754	High
636645	CDC48 Cell division control protein 48	2	17	High-throughput	0.737	High
772280	ATAD2 ATPase histone chaperone YTA7	2	18	High-throughput	0.737	High
772311	ORC1 Origin recognition complex subunit 1	2	7	High-throughput	0.737	High
772325	RUVB1 RuvB-like protein 1	2	7	High-throughput	0.737	High
772361	RUVB2 RuvB-like protein 2	2	7	High-throughput	0.737	High
772313	H3 Histone H3	6	14	Small-scale	0.719	High
692806	SPT16 FACT complex subunit SPT16	6	4	Small-scale	0.719	High
606031	RAD53 Serine/threonine-protein kinase RAD53	4	3	Small-scale	0.686	High
355908	H2B2 Histone H2B.2	4	6	High-throughput	0.672	High
356513	H4 Histone H4	4	5	High-throughput	0.672	High
392454	H2A2 Histone H2A.2	4	4	High-throughput	0.672	High
696215	STH1 Nuclear protein STH1/NPS1	4	5	Small-scale	0.672	High
710442	SAS3 Histone acetyltransferase SAS3	4	1	Small-scale	0.672	High
772331	POB3 FACT complex subunit POB3	4	1	Small-scale	0.672	High
772346	RSC3 Chromatin structure-remodeling complex protein RSC3	4	2	Small-scale	0.672	High
635511	RSC6 Chromatin structure-remodeling complex protein RSC6	4	0	Small-scale	0.643	High
772339	YL455 PWWP domain-containing protein YLR455W	4	0	Small-scale	0.643	High
772349	RSC58 Chromatin structure-remodeling complex protein RSC58	4	0	Small-scale	0.643	High
420133	TOP2 DNA topoisomerase 2	3	1	Small-scale	0.640	High
355504	H2B1 Histone H2B.1	3	6	High-throughput	0.633	High
697401	CHD1 Chromo domain-containing protein 1	3	3	High-throughput	0.633	High
744875	ISW1 ISWI chromatin-remodeling complex ATPase ISW1	3	5	High-throughput	0.633	High
772317	RSC4 Chromatin structure-remodeling complex subunit RSC4	3	12	High-throughput	0.633	High
772321	HOS3 Histone deacetylase HOS3	3	8	High-throughput	0.633	High
772335	ARP9 Actin-like protein ARP9	3	5	High-throughput	0.633	High
772342	RSC2 Chromatin structure-remodeling complex subunit RSC2	3	11	High-throughput	0.633	High
772357	NTO1 NuA3 HAT complex component NTO1	3	3	High-throughput	0.633	High
772363	CMR1 DNA damage-binding protein CMR1	3	8	High-throughput	0.633	High
772365	H2AZ Histone H2A.Z	3	6	High-throughput	0.633	High
339673	CDK1 Cyclin-dependent kinase 1	2	3	Small-scale	0.629	High
751268	RFC3 Replication factor C subunit 3	1	8	High-throughput	0.618	High
772281	RFC2 Replication factor C subunit 2	1	5	High-throughput	0.618	High
698660	RSC7 Chromatin structure-remodeling complex subunit RSC7	3	0	High-throughput	0.606	High
770086	RT106 Histone chaperone RTT106	3	0	Small-scale	0.606	High
772322	RSC9 Chromatin structure-remodeling complex subunit RSC9	3	0	High-throughput	0.606	High
772353	IOC2 ISWI one complex protein 2	3	0	High-throughput	0.606	High
392135	H2A1 Histone H2A.1	2	4	Small-scale	0.594	High
757942	CSK2C Casein kinase II subunit beta'	3	4	Small-scale	0.587	High
375411	RPB1 DNA-directed RNA polymerase II subunit RPB1	2	7	Small-scale	0.584	High
440043	RPB2 DNA-directed RNA polymerase II subunit RPB2	2	5	Small-scale	0.584	High
558089	RPB3 DNA-directed RNA polymerase II subunit RPB3	2	4	Small-scale	0.584	High
744774	MCM7 DNA replication licensing factor MCM7	2	4	Small-scale	0.584	High
772288	RSC8 Chromatin structure-remodeling complex protein RSC8	2	2	Small-scale	0.584	High
772290	CSK2B Casein kinase II subunit beta	3	4	Small-scale	0.578	High
772312	ORC4 Origin recognition complex subunit 4	1	1	High-throughput	0.575	High
584745	CSK22 Casein kinase II subunit alpha'	2	6	Small-scale	0.571	High
622166	MCM3 DNA replication licensing factor MCM3	2	5	High-throughput	0.571	High
667591	MCM2 DNA replication licensing factor MCM2	2	5	High-throughput	0.571	High
667858	MCM5 Minichromosome maintenance protein 5	2	3	High-throughput	0.571	High
687702	BTAF1 TATA-binding protein-associated factor MOT1	2	8	High-throughput	0.571	High
752914	YHI0 Putative proline--tRNA ligase YHR020W	2	1	High-throughput	0.571	High
757281	FKBP3 Peptidyl-prolyl cis-trans isomerase	2	6	High-throughput	0.571	High
772298	TAF6 Transcription initiation factor TFIID subunit 6	2	1	High-throughput	0.571	High
772340	FKBP4 FK506-binding protein 4	2	6	High-throughput	0.571	High
140783	FOB1 DNA replication fork-blocking protein FOB1	2	0	High-throughput	0.547	High
772307	H1 Histone H1	2	0	High-throughput	0.547	High
772328	IOC4 ISWI one complex protein 4	2	0	High-throughput	0.547	High
772338	SFH1 Chromatin structure-remodeling complex subunit SFH1	2	0	High-throughput	0.547	High
772299	APC10 Anaphase-promoting complex subunit DOC1	1	2	High-throughput	0.541	High
511531	SSB1 Ribosome-associated molecular chaperone SSB1	1	10	High-throughput	0.536	High
772294	NET1 Nucleolar protein NET1	2	1	High-throughput	0.521	High
772308	COPA Coatomer subunit alpha	2	6	High-throughput	0.521	High
772318	TOF2 Topoisomerase 1-associated factor 2	2	1	High-throughput	0.521	High
699553	BEM3 GTPase-activating protein BEM3	1	1	High-throughput	0.489	High
560677	BIP Endoplasmic reticulum chaperone BiP	1	6	High-throughput	0.481	High
655714	PRP45 Pre-mRNA-processing protein 45	1	2	Small-scale	0.481	High
690211	CDC3 Cell division control protein 3	1	2	High-throughput	0.481	High
697218	BRR2 Pre-mRNA-splicing helicase BRR2	1	4	Small-scale	0.481	High
710770	CASP Protein CASP	1	4	High-throughput	0.481	High
772286	GZF3 Protein GZF3	1	1	High-throughput	0.481	High
772345	HDA2 HDA1 complex subunit 2	1	1	High-throughput	0.481	High
334713	G3P3 Glyceraldehyde-3-phosphate dehydrogenase 3	1	1	High-throughput	0.479	High
375606	RPC1 DNA-directed RNA polymerase III subunit RPC1	1	7	High-throughput	0.479	High
388108	TOP1 DNA topoisomerase 1	1	1	High-throughput	0.479	High
415997	DED1 ATP-dependent RNA helicase DED1	1	3	High-throughput	0.479	High
429709	RPAC1 DNA-directed RNA polymerases I and III subunit RPAC1	1	4	High-throughput	0.479	High
501373	RPA1 DNA-directed RNA polymerase I subunit RPA190	1	7	High-throughput	0.479	High
550050	CSK21 Casein kinase II subunit alpha	1	7	Small-scale	0.479	High
593146	RPAB1 DNA-directed RNA polymerases I, II, and III subunit RPABC1	1	1	Small-scale	0.479	High
599471	VPS1 Vacuolar protein sorting-associated protein 1	1	3	High-throughput	0.479	High
601759	RCC1 Guanine nucleotide exchange factor SRM1	1	3	High-throughput	0.479	High
604565	RPA2 DNA-directed RNA polymerase I subunit RPA135	1	5	High-throughput	0.479	High
606664	RPC2 DNA-directed RNA polymerase III subunit RPC2	1	5	High-throughput	0.479	High
607282	RFA1 Replication factor A protein 1	1	3	High-throughput	0.479	High
662392	TF2B Transcription initiation factor IIB	1	5	High-throughput	0.479	High
664865	BMH1 Protein BMH1	1	10	High-throughput	0.479	High
675528	MCM4 DNA replication licensing factor MCM4	1	5	High-throughput	0.479	High
687392	EF2 Elongation factor 2	1	4	High-throughput	0.479	High
688270	RPC3 DNA-directed RNA polymerase III subunit RPC3	1	2	High-throughput	0.479	High
698829	GSP1 GTP-binding nuclear protein GSP1/CNR1	1	9	High-throughput	0.479	High
699688	DRS1 ATP-dependent RNA helicase DRS1	1	6	High-throughput	0.479	High
703059	MRT4 Ribosome assembly factor MRT4	1	5	High-throughput	0.479	High
728698	BDF1 Bromodomain-containing factor 1	1	13	High-throughput	0.479	High
730819	CENPA Histone H3-like centromeric protein CSE4	1	14	Small-scale	0.479	High
742829	GBLP Small ribosomal subunit protein RACK1	1	6	High-throughput	0.479	High
754240	RSC30 Chromatin structure-remodeling complex protein RSC30	1	2	High-throughput	0.479	High
772282	MAM33 Mitochondrial acidic protein MAM33	1	2	High-throughput	0.479	High
772283	DSN1 Kinetochore-associated protein DSN1	1	1	High-throughput	0.479	High
772295	SMC3 Structural maintenance of chromosomes protein 3	1	1	Small-scale	0.479	High
772302	PRP43 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43	1	2	High-throughput	0.479	High
772303	NSA1 Ribosome biogenesis protein NSA1	1	2	High-throughput	0.479	High
772310	APJ1 J domain-containing protein APJ1	1	9	High-throughput	0.479	High
772315	ACAC Acetyl-CoA carboxylase	1	5	High-throughput	0.479	High
772319	ULP1 Ubiquitin-like-specific protease 1	1	2	High-throughput	0.479	High
772326	HMO1 High mobility group protein 1	1	2	High-throughput	0.479	High
772327	SCC2 Sister chromatid cohesion protein 2	1	1	High-throughput	0.479	High
772330	DPB4 DNA polymerase epsilon subunit D	1	1	Small-scale	0.479	High
772332	ERB1 Ribosome biogenesis protein ERB1	1	6	High-throughput	0.479	High
772336	SWR1 Helicase SWR1	1	5	High-throughput	0.479	High
772337	MMS22 E3 ubiquitin-protein ligase substrate receptor MMS22	1	1	High-throughput	0.479	High
772348	BDF2 Bromodomain-containing factor 2	1	5	High-throughput	0.479	High
772350	SGO1 Shugoshin	1	2	High-throughput	0.479	High
772352	YTM1 Ribosome biogenesis protein YTM1	1	13	High-throughput	0.479	High
772354	YRA1 RNA annealing protein YRA1	1	4	High-throughput	0.479	High
772355	PSH1 RING finger protein PSH1	1	4	High-throughput	0.479	High
772356	MAK21 Ribosome biogenesis protein MAK21	1	3	High-throughput	0.479	High
772359	ARP7 Actin-related protein 7	1	3	High-throughput	0.479	High
772360	NOP56 Nucleolar protein 56	1	1	High-throughput	0.479	High
772364	IF6 Eukaryotic translation initiation factor 6	1	1	High-throughput	0.479	High
772366	SMC6 Structural maintenance of chromosomes protein 6	1	4	High-throughput	0.479	High
702673	TYE7 Transcription factor TYE7	1	0	High-throughput	0.460	High
772293	TAF1 Transcription initiation factor TFIID subunit 1	1	0	High-throughput	0.460	High
772344	NDE1 Nuclear distribution protein nudE homolog 1	1	0	High-throughput	0.460	High
419480	PDE2 3',5'-cyclic-nucleotide phosphodiesterase 2	1	0	High-throughput	0.458	High
604686	RPAB5 DNA-directed RNA polymerases I, II, and III subunit RPABC5	1	0	Small-scale	0.458	High
716257	SPT10 Protein SPT10	1	0	High-throughput	0.458	High
746445	LDB7 Chromatin structure-remodeling complex protein RSC14	1	0	High-throughput	0.458	High
755825	LSM12 Protein LSM12	1	0	High-throughput	0.458	High
757134	RPB11 DNA-directed RNA polymerase II subunit RPB11	1	0	High-throughput	0.458	High
772287	IOC3 ISWI one complex protein 3	1	0	High-throughput	0.458	High
772291	RPA43 DNA-directed RNA polymerase I subunit RPA43	1	0	High-throughput	0.458	High
772304	PBP1 PAB1-binding protein 1	1	0	High-throughput	0.458	High
772305	RT102 Regulator of Ty1 transposition protein 102	1	0	High-throughput	0.458	High
772316	RPA49 DNA-directed RNA polymerase I subunit RPA49	1	0	High-throughput	0.458	High
772343	RRP15 Ribosomal RNA-processing protein 15	1	0	High-throughput	0.458	High
772358	HAT1 Histone acetyltransferase type B catalytic subunit	1	0	High-throughput	0.458	High
772367	HTL1 High temperature lethal protein 1	1	0	High-throughput	0.458	High
366384	HSP82 ATP-dependent molecular chaperone HSP82	1	9	High-throughput	0.445	High
472576	YL12B Transposon Ty1-LR2 Gag-Pol polyprotein	1	2	High-throughput	0.445	High
491406	HSP71 Heat shock protein SSA1	1	10	High-throughput	0.445	High
494118	HSP72 Heat shock protein SSA2	1	10	High-throughput	0.445	High
519951	TCPA T-complex protein 1 subunit alpha	1	7	High-throughput	0.445	High
543848	HSC82 ATP-dependent molecular chaperone HSC82	1	9	High-throughput	0.445	High
633271	MAS5 Mitochondrial protein import protein MAS5	1	9	High-throughput	0.445	High
650306	SPT5 Transcription elongation factor SPT5	1	2	High-throughput	0.445	High
660917	IDH1 Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial	1	4	High-throughput	0.445	High
678744	RAD16 DNA repair protein RAD16	1	8	High-throughput	0.445	High
690879	HIR2 Protein HIR2	1	6	High-throughput	0.445	High
694812	HSP7F Heat shock protein homolog SSE1	1	17	High-throughput	0.445	High
715806	MDJ1 DnaJ homolog 1, mitochondrial	1	10	High-throughput	0.445	High
744631	TAF5 Transcription initiation factor TFIID subunit 5	1	13	High-throughput	0.445	High
751031	RCK1 Serine/threonine-protein kinase RCK1	1	4	High-throughput	0.445	High
754234	YHL4 Uncharacterized protein YHR054C	1	1	High-throughput	0.445	High
766033	HSP7E Heat shock protein SSC3, mitochondrial	1	7	High-throughput	0.445	High
767650	IMB4 Importin subunit beta-4	1	2	High-throughput	0.445	High
768577	SSB2 Ribosome-associated molecular chaperone SSB2	1	10	High-throughput	0.445	High
772296	TCPQ T-complex protein 1 subunit theta	1	6	High-throughput	0.445	High
772300	INO80 Chromatin-remodeling ATPase INO80	1	7	High-throughput	0.445	High
772323	GCN5 Histone acetyltransferase GCN5	1	12	High-throughput	0.445	High
772324	TAF12 Transcription initiation factor TFIID subunit 12	1	1	High-throughput	0.445	High
772333	RCO1 Transcriptional regulatory protein RCO1	1	4	High-throughput	0.445	High
772347	SWA2 Auxilin-like clathrin uncoating factor SWA2	1	5	High-throughput	0.445	High
772351	ISW2 ISWI chromatin-remodeling complex ATPase ISW2	1	6	High-throughput	0.445	High
772362	RLF2 Chromatin assembly factor 1 subunit p90	1	2	High-throughput	0.445	High
440153	ERG20 Farnesyl pyrophosphate synthase	1	1	Small-scale	0.439	High
772341	SP382 Pre-mRNA-splicing factor SPP382	1	0	High-throughput	0.438	High
693851	SRP40 Suppressor protein SRP40	1	3	High-throughput	0.437	High
754128	CIC1 Proteasome-interacting protein CIC1	1	2	High-throughput	0.437	High
772320	UTP17 NET1-associated nuclear protein 1	1	3	High-throughput	0.437	High
419344	HAP2 Transcriptional activator HAP2	1	0	High-throughput	0.426	High
554661	HSP26 Heat shock protein 26	1	0	High-throughput	0.426	High
587858	AP1 AP-1-like transcription factor YAP1	1	0	High-throughput	0.426	High
609096	SIN3 Transcriptional regulatory protein SIN3	1	0	High-throughput	0.426	High
691322	NGG1 Chromatin-remodeling complexes subunit NGG1	1	0	High-throughput	0.426	High
716094	CENPC Inner kinetochore subunit MIF2	1	0	High-throughput	0.426	High
733253	SET3 SET domain-containing protein 3	1	0	High-throughput	0.426	High
752370	IMDH2 Inosine-5'-monophosphate dehydrogenase 2	1	0	High-throughput	0.426	High
772292	SUM1 Suppressor of mar1-1 protein	1	0	High-throughput	0.426	High
772297	PFD6 Prefoldin subunit 6	1	0	High-throughput	0.426	High
772301	ITC1 Imitation switch two complex protein 1	1	0	High-throughput	0.426	High
772306	RRN9 RNA polymerase I-specific transcription initiation factor RRN9	1	0	High-throughput	0.426	High
685534	COPG Coatomer subunit gamma	1	5	High-throughput	0.407	High
764845	SNF7 Vacuolar-sorting protein SNF7	1	4	High-throughput	0.407	High
770504	EIF3I Eukaryotic translation initiation factor 3 subunit I	1	8	High-throughput	0.407	High
772284	COPB2 Coatomer subunit beta'	1	6	High-throughput	0.407	High
772285	MPG1 Mannose-1-phosphate guanyltransferase	1	1	High-throughput	0.407	High
772289	ERJ5 ER-localized J domain-containing protein 5	1	7	High-throughput	0.407	High
772329	PFD5 Prefoldin subunit 5	1	2	High-throughput	0.407	High
772309	SNZ2 Probable pyridoxal 5'-phosphate synthase subunit SNZ2	2	0	High-throughput	0.298	High
629733	STE50 Protein STE50	1	0	High-throughput	0.251	Low
767881	SHO1 High osmolarity signaling protein SHO1	1	0	Small-scale	0.251	Low
772314	DID2 Vacuolar protein-sorting-associated protein 46	1	0	High-throughput	0.232	Low
772334	SNO4 Probable glutathione-independent glyoxalase SNO4	1	0	High-throughput	0.232	Low