Protein: YTM1
Ribosome biogenesis protein YTM1 (Microtubule-associated protein YTM1)

Gene: YTM1
Organism: Saccharomyces cerevisiae S288C
Interactions: 160
UniProt ID: Q12024

Gene Ontology (top 5):
GO:0000463 - maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000466 - maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0005730 - nucleolus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

980177

ERB1
Ribosome biogenesis protein ERB1

13

18

Small-scale

0.985

High

634465

SPB1
27S pre-rRNA

3

10

High-throughput

0.827

High

594083

MAK11
Protein MAK11

3

17

Small-scale

0.817

High

860909

PESC
Pescadillo homolog

19

4

Small-scale

0.764

High

1014866

YTM1
Ribosome biogenesis protein YTM1

2

16

Small-scale

0.754

High

733969

RPF2
Ribosome biogenesis protein RPF2

10

2

Small-scale

0.752

High

859529

NSA1
Ribosome biogenesis protein NSA1

9

3

Small-scale

0.750

High

754219

CIC1
Proteasome-interacting protein CIC1

8

5

Small-scale

0.746

High

778885

NOP2
25S rRNA

7

6

Small-scale

0.742

High

754933

SSF1
Ribosome biogenesis protein SSF1

7

2

Small-scale

0.740

High

973481

NOG1
Nucleolar GTP-binding protein 1

7

6

Small-scale

0.736

High

1014870

MAK21
Ribosome biogenesis protein MAK21

6

7

High-throughput

0.729

High

638889

SPB4
ATP-dependent rRNA helicase SPB4

6

20

High-throughput

0.726

High

764270

NOC2
Nucleolar complex protein 2

6

1

Small-scale

0.726

High

776540

RLP7
Ribosome biogenesis protein RLP7

6

9

Small-scale

0.726

High

976885

HAS1
ATP-dependent RNA helicase HAS1

6

20

Small-scale

0.726

High

744257

MAK5
ATP-dependent RNA helicase MAK5

5

20

High-throughput

0.712

High

866284

NOP15
Ribosome biogenesis protein 15

5

20

High-throughput

0.712

High

699745

DRS1
ATP-dependent RNA helicase DRS1

5

20

Small-scale

0.709

High

992546

NOC3
Nucleolar complex-associated protein 3

5

3

Small-scale

0.709

High

1014873

DBP10
ATP-dependent RNA helicase DBP10

5

20

High-throughput

0.709

High

979468

PUF6
Pumilio homology domain family member 6

5

4

Small-scale

0.706

High

667297

RL8B
Large ribosomal subunit protein eL8B

2

11

High-throughput

0.705

High

1014875

IF6
Eukaryotic translation initiation factor 6

4

2

Small-scale

0.694

High

965066

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

14

High-throughput

0.691

High

766727

NUG1
Nuclear GTP-binding protein NUG1

4

11

High-throughput

0.686

High

768066

NSA2
Ribosome biogenesis protein NSA2

4

3

Small-scale

0.676

High

731887

EBP2
rRNA-processing protein EBP2

4

3

Small-scale

0.672

High

1014855

MDN1
Midasin

3

20

Small-scale

0.665

High

742086

NOP4
Nucleolar protein 4

3

13

High-throughput

0.662

High

755348

RPF1
Ribosome production factor 1

4

0

High-throughput

0.661

High

715503

RRP1
Ribosomal RNA-processing protein 1

3

5

Small-scale

0.656

High

982910

RRP5
rRNA biogenesis protein RRP5

3

19

High-throughput

0.656

High

994466

BRX1
Ribosome biogenesis protein BRX1

3

8

Small-scale

0.656

High

997032

NIP7
60S ribosome subunit biogenesis protein NIP7

3

1

Small-scale

0.656

High

887709

ACT
Actin

1

9

High-throughput

0.646

High

978447

RRP17
Ribosomal RNA-processing protein 17

3

1

High-throughput

0.640

High

811810

URB2
Nucleolar pre-ribosomal-associated protein 2

3

0

High-throughput

0.618

High

597916

PWP1
Periodic tryptophan protein 1

1

19

High-throughput

0.618

High

743045

GBLP
Small ribosomal subunit protein RACK1

1

17

High-throughput

0.618

High

810946

MTR4
ATP-dependent RNA helicase DOB1

1

20

Small-scale

0.618

High

979119

RRB1
Ribosome assembly protein RRB1

1

18

High-throughput

0.618

High

766610

NOP16
Nucleolar protein 16

3

0

Small-scale

0.613

High

499108

RL4A
Large ribosomal subunit protein uL4A

2

5

High-throughput

0.611

High

703137

MRT4
Ribosome assembly factor MRT4

2

8

High-throughput

0.611

High

797413

LOC1
60S ribosomal subunit assembly/export protein LOC1

2

0

High-throughput

0.585

High

535151

RL3
Large ribosomal subunit protein uL3

2

9

High-throughput

0.584

High

748739

ENP1
Essential nuclear protein 1

2

2

High-throughput

0.584

High

792622

UTP10
U3 small nucleolar RNA-associated protein 10

2

4

High-throughput

0.584

High

986488

FKBP4
FK506-binding protein 4

2

9

High-throughput

0.584

High

992264

GRC3
Polynucleotide 5'-hydroxyl-kinase GRC3

2

1

High-throughput

0.584

High

992630

RLP24
Ribosome biogenesis protein RLP24

2

4

Small-scale

0.584

High

1014867

NOP53
Ribosome biogenesis protein NOP53

2

2

High-throughput

0.584

High

1014874

NOP58
Nucleolar protein 58

2

8

High-throughput

0.584

High

628565

SIS1
Protein SIS1

2

12

High-throughput

0.571

High

996379

RRS1
Regulator of ribosome biosynthesis

2

3

High-throughput

0.571

High

1014869

SSF2
Ribosome biogenesis protein SSF2

2

2

High-throughput

0.571

High

358300

RS17A
Small ribosomal subunit protein eS17A

1

2

High-throughput

0.553

High

564393

RL8A
Large ribosomal subunit protein eL8A

1

11

Small-scale

0.553

High

820222

RS12
Small ribosomal subunit protein eS12

1

2

High-throughput

0.553

High

860409

EIF2A
Eukaryotic translation initiation factor 2A

1

2

High-throughput

0.553

High

495221

HSP72
Heat shock protein SSA2

2

17

High-throughput

0.552

High

513080

SSB1
Ribosome-associated molecular chaperone SSB1

2

18

High-throughput

0.552

High

769721

SSB2
Ribosome-associated molecular chaperone SSB2

2

18

High-throughput

0.552

High

404726

RL7A
Large ribosomal subunit protein uL30A

1

9

High-throughput

0.536

High

641096

RL5
Large ribosomal subunit protein uL18

1

6

High-throughput

0.536

High

676448

XPO1
Exportin-1

1

11

High-throughput

0.536

High

696426

PP12
Serine/threonine-protein phosphatase PP1-2

1

8

High-throughput

0.536

High

992250

RIX7
Ribosome biogenesis ATPase RIX7

1

11

High-throughput

0.536

High

995483

DNLI4
DNA ligase 4

1

1

High-throughput

0.536

High

1014871

RL7B
Large ribosomal subunit protein uL30B

1

9

High-throughput

0.536

High

629074

SCJ1
DnaJ-related protein SCJ1

2

10

High-throughput

0.533

High

419403

HAP2
Transcriptional activator HAP2

1

0

High-throughput

0.513

High

748584

YB92
5'-deoxynucleotidase YBR242W

1

0

High-throughput

0.513

High

865469

ELOA1
Elongin-A

1

0

High-throughput

0.513

High

991546

NOP6
Nucleolar protein 6

1

0

High-throughput

0.513

High

991942

YPD1
Phosphorelay intermediate protein YPD1

1

0

High-throughput

0.513

High

412489

KIN28
Serine/threonine-protein kinase KIN28

1

11

High-throughput

0.501

High

592992

SRP54
Signal recognition particle subunit SRP54

1

1

High-throughput

0.489

High

710078

VPS35
Vacuolar protein sorting-associated protein 35

1

1

High-throughput

0.489

High

758719

TEM1
Protein TEM1

1

6

High-throughput

0.489

High

774158

TM108
Protein TMA108

1

2

High-throughput

0.489

High

1014868

RTK1
Probable serine/threonine-protein kinase RTK1

1

9

High-throughput

0.489

High

1014876

RL13A
Large ribosomal subunit protein eL13A

1

4

High-throughput

0.489

High

141566

RS9A
Small ribosomal subunit protein uS4A

1

6

High-throughput

0.479

High

356779

H4
Histone H4

1

9

High-throughput

0.479

High

383397

RL25
Large ribosomal subunit protein uL23

1

4

High-throughput

0.479

High

392598

H2A2
Histone H2A.2

1

10

High-throughput

0.479

High

405874

RL26A
Large ribosomal subunit protein uL24A

1

4

High-throughput

0.479

High

407380

RS3
Small ribosomal subunit protein uS3

1

6

High-throughput

0.479

High

413755

RS14A
Small ribosomal subunit protein uS11A

1

5

High-throughput

0.479

High

420183

TOP2
DNA topoisomerase 2

1

10

High-throughput

0.479

High

480368

RS6A
Small ribosomal subunit protein eS6A

1

5

High-throughput

0.479

High

482952

RL35A
Large ribosomal subunit protein uL29A

1

2

Small-scale

0.479

High

501267

MAK16
Protein MAK16

1

3

High-throughput

0.479

High

606165

RAD53
Serine/threonine-protein kinase RAD53

1

2

High-throughput

0.479

High

632138

RS2
Small ribosomal subunit protein uS5

1

5

High-throughput

0.479

High

634811

KRR1
KRR1 small subunit processome component

1

1

High-throughput

0.479

High

645700

RS7A
Small ribosomal subunit protein eS7A

1

4

High-throughput

0.479

High

663590

TF2B
Transcription initiation factor IIB

1

3

High-throughput

0.479

High

704443

CBF5
H/ACA ribonucleoprotein complex subunit CBF5

1

6

High-throughput

0.479

High

733172

DBP7
ATP-dependent RNA helicase DBP7

1

20

High-throughput

0.479

High

746280

YBC8
UPF0642 protein YBL028C

1

1

High-throughput

0.479

High

756886

RIX1
Pre-rRNA-processing protein RIX1

1

1

Small-scale

0.479

High

757370

FKBP3
Peptidyl-prolyl cis-trans isomerase

1

11

High-throughput

0.479

High

772352

ATAD2
ATPase histone chaperone YTA7

1

13

High-throughput

0.479

High

775284

ULP2
Ubiquitin-like-specific protease 2

1

7

High-throughput

0.479

High

861627

YG5X
Putative methyltransferase YGR283C

1

1

High-throughput

0.479

High

864703

NOG2
Nucleolar GTP-binding protein 2

1

11

High-throughput

0.479

High

865773

NOP13
Nucleolar protein 13

1

20

High-throughput

0.479

High

866537

APJ1
J domain-containing protein APJ1

1

13

High-throughput

0.479

High

866868

RCM1
25S rRNA

1

6

High-throughput

0.479

High

902125

H3
Histone H3

1

11

High-throughput

0.479

High

975857

TOM1
E3 ubiquitin-protein ligase TOM1

1

8

High-throughput

0.479

High

979070

DHR1
Probable ATP-dependent RNA helicase DHR1

1

17

High-throughput

0.479

High

979743

UTP14
U3 small nucleolar RNA-associated protein 14

1

12

High-throughput

0.479

High

981819

YM91
Putative methyltransferase YMR310C

1

1

High-throughput

0.479

High

986272

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

1

High-throughput

0.479

High

986589

JIP5
WD repeat-containing protein JIP5

1

18

High-throughput

0.479

High

986625

DBP9
ATP-dependent RNA helicase DBP9

1

19

High-throughput

0.479

High

987684

NOC4
Nucleolar complex protein 4

1

7

High-throughput

0.479

High

994060

NOP12
Nucleolar protein 12

1

17

High-throughput

0.479

High

635173

YCQ6
Uncharacterized protein YCR016W

1

0

High-throughput

0.458

High

688478

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.458

High

732260

RRP14
Ribosomal RNA-processing protein 14

1

0

High-throughput

0.458

High

860135

NMA2
Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2

1

0

High-throughput

0.458

High

987652

RRP15
Ribosomal RNA-processing protein 15

1

0

High-throughput

0.458

High

995823

SGO1
Shugoshin

1

0

High-throughput

0.458

High

378408

LEU3
3-isopropylmalate dehydrogenase

1

4

High-throughput

0.457

High

492734

HSP71
Heat shock protein SSA1

1

16

High-throughput

0.445

High

695737

HSP7F
Heat shock protein homolog SSE1

1

20

High-throughput

0.445

High

426194

RS19A
Small ribosomal subunit protein eS19A

1

2

High-throughput

0.437

High

471304

RS22A
Small ribosomal subunit protein uS8A

1

3

High-throughput

0.437

High

472439

RL31A
Large ribosomal subunit protein eL31A

1

2

High-throughput

0.437

High

480936

RS8A
Small ribosomal subunit protein eS8A

1

4

High-throughput

0.437

High

482501

RS18A
Small ribosomal subunit protein uS13A

1

3

High-throughput

0.437

High

637171

CYPC
Peptidyl-prolyl cis-trans isomerase C, mitochondrial

1

3

High-throughput

0.437

High

645155

RL16A
Large ribosomal subunit protein uL13A

1

7

High-throughput

0.437

High

700669

RSSA1
Small ribosomal subunit protein uS2A

1

3

High-throughput

0.437

High

706543

RS3A1
Small ribosomal subunit protein eS1A

1

2

High-throughput

0.437

High

730162

RS27A
Small ribosomal subunit protein eS27A

1

2

High-throughput

0.437

High

752717

RS20
Small ribosomal subunit protein uS10

1

2

High-throughput

0.437

High

762644

LAA1
AP-1 accessory protein LAA1

1

1

High-throughput

0.437

High

852240

YPT32
GTP-binding protein YPT32/YPT11

1

3

High-throughput

0.437

High

959893

NUM1
Nuclear migration protein NUM1

1

15

High-throughput

0.437

High

967812

RS15
Small ribosomal subunit protein uS19

1

1

High-throughput

0.437

High

996274

HRK1
Serine/threonine-protein kinase HRK1

1

7

High-throughput

0.437

High

996340

RS10A
Small ribosomal subunit protein eS10A

1

7

High-throughput

0.437

High

361069

TBB
Tubulin beta chain

1

17

High-throughput

0.407

High

368485

EF1A
Elongation factor 1-alpha

1

4

High-throughput

0.407

High

399663

RLA0
Large ribosomal subunit protein uL10

1

8

High-throughput

0.407

High

424759

PYR1
Multifunctional protein URA2

1

9

High-throughput

0.407

High

761104

TCPZ
T-complex protein 1 subunit zeta

1

20

High-throughput

0.407

High

811492

TCPQ
T-complex protein 1 subunit theta

1

20

High-throughput

0.407

High

1014872

HSP42
Heat shock protein 42

1

2

High-throughput

0.407

High

981015

SOV1
Protein SOV1, mitochondrial

1

0

High-throughput

0.261

Low

524477

CAF20
Cap-associated protein CAF20

1

0

High-throughput

0.249

Low

991334

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low

810190

PFD1
Prefoldin subunit 1

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024