Protein: UTP23
rRNA-processing protein UTP23 (U three protein 23) (U3 small nucleolar RNA-associated protein 23) (U3 snoRNA-associated protein 23)

Gene: UTP23
Organism: Saccharomyces cerevisiae S288C
Interactions: 133
UniProt ID: Q12339

Gene Ontology (top 5):
GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005654 - nucleoplasm

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1015495

UTP23
rRNA-processing protein UTP23

3

2

Small-scale

0.850

High

983786

FCF1
rRNA-processing protein FCF1

1

2

Small-scale

0.647

High

141586

RS9A
Small ribosomal subunit protein uS4A

1

1

High-throughput

0.618

High

634829

KRR1
KRR1 small subunit processome component

2

2

High-throughput

0.614

High

691443

NHP2
H/ACA ribonucleoprotein complex subunit NHP2

2

2

Small-scale

0.595

High

655915

GAR1
H/ACA ribonucleoprotein complex subunit GAR1

2

0

High-throughput

0.588

High

978655

UTP5
U3 small nucleolar RNA-associated protein 5

1

2

High-throughput

0.541

High

605185

XRN1
5'-3' exoribonuclease 1

2

1

High-throughput

0.521

High

811581

MPP10
U3 small nucleolar RNA-associated protein MPP10

1

1

Small-scale

0.515

High

630564

RRP7
Ribosomal RNA-processing protein 7

1

2

Small-scale

0.501

High

791293

KRI1
Protein KRI1

1

1

Small-scale

0.501

High

799880

ROK1
ATP-dependent RNA helicase ROK1

1

3

Small-scale

0.501

High

408188

RS13
Small ribosomal subunit protein uS15

1

1

High-throughput

0.479

High

480381

RS6A
Small ribosomal subunit protein eS6A

1

1

High-throughput

0.479

High

480950

RS8A
Small ribosomal subunit protein eS8A

1

1

High-throughput

0.479

High

630295

RRP43
Exosome complex component RRP43

1

1

High-throughput

0.479

High

632151

RS2
Small ribosomal subunit protein uS5

1

2

High-throughput

0.479

High

638901

SPB4
ATP-dependent rRNA helicase SPB4

1

5

High-throughput

0.479

High

679597

RM09
Large ribosomal subunit protein uL3m

1

2

High-throughput

0.479

High

696900

RML2
Large ribosomal subunit protein uL2m

1

1

High-throughput

0.479

High

700687

RSSA1
Small ribosomal subunit protein uS2A

1

2

High-throughput

0.479

High

706559

RS3A1
Small ribosomal subunit protein eS1A

1

1

High-throughput

0.479

High

735309

RM07
Large ribosomal subunit protein uL5m

1

2

High-throughput

0.479

High

746367

LSM2
U6 snRNA-associated Sm-like protein LSm2

1

1

High-throughput

0.479

High

748749

ENP1
Essential nuclear protein 1

1

1

High-throughput

0.479

High

792633

UTP10
U3 small nucleolar RNA-associated protein 10

1

1

High-throughput

0.479

High

866566

APJ1
J domain-containing protein APJ1

1

2

High-throughput

0.479

High

972657

XRN2
5'-3' exoribonuclease 2

1

1

High-throughput

0.479

High

979084

DHR1
Probable ATP-dependent RNA helicase DHR1

1

2

High-throughput

0.479

High

987699

NOC4
Nucleolar complex protein 4

1

2

High-throughput

0.479

High

988658

UTP4
U3 small nucleolar RNA-associated protein 4

1

2

Small-scale

0.479

High

1015496

NOP56
Nucleolar protein 56

1

3

High-throughput

0.479

High

1015497

RM23
Large ribosomal subunit protein uL13m

1

1

High-throughput

0.479

High

1015498

NOP58
Nucleolar protein 58

1

3

High-throughput

0.479

High

413773

RS14A
Small ribosomal subunit protein uS11A

1

0

High-throughput

0.458

High

482518

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.458

High

520568

RM02
Large ribosomal subunit protein bL27m

1

0

High-throughput

0.458

High

534511

RM31
Large ribosomal subunit protein mL60

1

0

High-throughput

0.458

High

589408

RM33
Large ribosomal subunit protein uL30m

1

0

High-throughput

0.458

High

597355

PSA1
Proteasome subunit alpha type-1

1

0

High-throughput

0.458

High

607449

RM08
Large ribosomal subunit protein bL17m

1

0

High-throughput

0.458

High

607516

RM20
Large ribosomal subunit protein mL58

1

0

High-throughput

0.458

High

615640

RM25
Large ribosomal subunit protein mL59

1

0

High-throughput

0.458

High

624198

DBP2
ATP-dependent RNA helicase DBP2

1

0

High-throughput

0.458

High

629884

RM32
Large ribosomal subunit protein bL32m

1

0

High-throughput

0.458

High

635410

IMG1
Large ribosomal subunit protein bL19m

1

0

High-throughput

0.458

High

635809

IMG2
Large ribosomal subunit protein mL49

1

0

High-throughput

0.458

High

645716

RS7A
Small ribosomal subunit protein eS7A

1

0

High-throughput

0.458

High

689558

RM41
Large ribosomal subunit protein uL23m

1

0

High-throughput

0.458

High

689606

RM49
Large ribosomal subunit protein mL61

1

0

High-throughput

0.458

High

700298

RM06
Large ribosomal subunit protein uL6m

1

0

High-throughput

0.458

High

729832

RM38
Large ribosomal subunit protein uL14m

1

0

High-throughput

0.458

High

730178

RS27A
Small ribosomal subunit protein eS27A

1

0

High-throughput

0.458

High

735185

RM03
Large ribosomal subunit protein mL44

1

0

High-throughput

0.458

High

735255

RM04
Large ribosomal subunit protein uL29m

1

0

High-throughput

0.458

High

735377

RM10
Large ribosomal subunit protein uL15m

1

0

High-throughput

0.458

High

735426

RM11
Large ribosomal subunit protein uL10m

1

0

High-throughput

0.458

High

735494

RM15
Large ribosomal subunit protein mL57

1

0

High-throughput

0.458

High

735545

RM24
Large ribosomal subunit protein bL28m

1

0

High-throughput

0.458

High

735584

RM27
Large ribosomal subunit protein mL41

1

0

High-throughput

0.458

High

735641

RM28
Large ribosomal subunit protein mL40

1

0

High-throughput

0.458

High

735708

RM17
Large ribosomal subunit protein mL46

1

0

High-throughput

0.458

High

735757

RM36
Large ribosomal subunit protein bL31m

1

0

High-throughput

0.458

High

735786

RM37
Large ribosomal subunit protein mL54

1

0

High-throughput

0.458

High

735815

RM39
Large ribosomal subunit protein bL33m

1

0

High-throughput

0.458

High

735861

RM40
Large ribosomal subunit protein uL24m

1

0

High-throughput

0.458

High

743387

RM16
Large ribosomal subunit protein uL16m

1

0

High-throughput

0.458

High

752732

RS20
Small ribosomal subunit protein uS10

1

0

High-throughput

0.458

High

767847

LSM4
U6 snRNA-associated Sm-like protein LSm4

1

0

High-throughput

0.458

High

777382

RN49
Large ribosomal subunit protein bL21m

1

0

High-throughput

0.458

High

852273

RL4P
Large ribosomal subunit protein uL4m

1

0

High-throughput

0.458

High

859781

MNP1
Large ribosomal subunit protein bL12m

1

0

High-throughput

0.458

High

864425

RM50
Large ribosomal subunit protein bL9m

1

0

High-throughput

0.458

High

865655

RM19
Large ribosomal subunit protein uL11m

1

0

High-throughput

0.458

High

865731

RM22
Large ribosomal subunit protein uL22m

1

0

High-throughput

0.458

High

866227

RN35
Large ribosomal subunit protein bL35m

1

0

High-throughput

0.458

High

969395

RM13
Large ribosomal subunit protein mL50

1

0

High-throughput

0.458

High

975185

ATP25
ATPase synthesis protein 25, mitochondrial

1

0

High-throughput

0.458

High

979789

RM01
Large ribosomal subunit protein uL1m

1

0

High-throughput

0.458

High

985854

RM51
Large ribosomal subunit protein mL43

1

0

High-throughput

0.458

High

988471

MHR1
Large ribosomal subunit protein mL67

1

0

High-throughput

0.458

High

988638

RM35
Large ribosomal subunit protein mL38

1

0

High-throughput

0.458

High

495328

HSP72
Heat shock protein SSA2

1

1

High-throughput

0.445

High

541824

SEC63
Protein translocation protein SEC63

1

1

High-throughput

0.445

High

707954

GCN1
eIF-2-alpha kinase activator GCN1

1

1

High-throughput

0.445

High

761420

XDJ1
DnaJ protein homolog XDJ1

1

2

High-throughput

0.445

High

860777

UTP22
U3 small nucleolar RNA-associated protein 22

1

1

High-throughput

0.445

High

982923

RRP5
rRNA biogenesis protein RRP5

1

1

High-throughput

0.445

High

985917

MRD1
Multiple RNA-binding domain-containing protein 1

1

1

High-throughput

0.445

High

404742

RL7A
Large ribosomal subunit protein uL30A

1

1

High-throughput

0.437

High

405889

RL26A
Large ribosomal subunit protein uL24A

1

1

High-throughput

0.437

High

426209

RS19A
Small ribosomal subunit protein eS19A

1

1

High-throughput

0.437

High

471319

RS22A
Small ribosomal subunit protein uS8A

1

2

High-throughput

0.437

High

472455

RL31A
Large ribosomal subunit protein eL31A

1

2

High-throughput

0.437

High

535165

RL3
Large ribosomal subunit protein uL3

1

1

High-throughput

0.437

High

704453

CBF5
H/ACA ribonucleoprotein complex subunit CBF5

1

1

High-throughput

0.437

High

996354

RS10A
Small ribosomal subunit protein eS10A

1

1

High-throughput

0.437

High

1015196

YRA1
RNA annealing protein YRA1

1

1

High-throughput

0.437

High

368517

EF1A
Elongation factor 1-alpha

1

0

High-throughput

0.426

High

804929

SYEC
Glutamate--tRNA ligase, cytoplasmic

1

0

High-throughput

0.426

High

492866

HSP71
Heat shock protein SSA1

1

1

High-throughput

0.407

High

499121

RL4A
Large ribosomal subunit protein uL4A

1

2

High-throughput

0.407

High

628599

SIS1
Protein SIS1

1

1

High-throughput

0.407

High

695830

HSP7F
Heat shock protein homolog SSE1

1

2

High-throughput

0.407

High

524486

CAF20
Cap-associated protein CAF20

2

0

High-throughput

0.305

High

358316

RS17A
Small ribosomal subunit protein eS17A

2

0

High-throughput

0.298

High

743062

GBLP
Small ribosomal subunit protein RACK1

2

0

High-throughput

0.298

High

731788

SN114
Pre-mRNA-splicing factor SNU114

1

0

High-throughput

0.282

High

383413

RL25
Large ribosomal subunit protein uL23

1

0

High-throughput

0.249

Low

407400

RS3
Small ribosomal subunit protein uS3

1

0

High-throughput

0.249

Low

408497

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

0

High-throughput

0.249

Low

632510

PSB3
Proteasome subunit beta type-3

1

0

High-throughput

0.249

Low

635947

PAT1
Deadenylation-dependent mRNA-decapping factor PAT1

1

0

High-throughput

0.249

Low

663699

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.249

Low

731628

EAP1
Protein EAP1

1

0

High-throughput

0.249

Low

745950

NU170
Nucleoporin NUP170

1

0

High-throughput

0.249

Low

751187

PSB1
Proteasome subunit beta type-1

1

0

High-throughput

0.249

Low

762678

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.249

Low

775905

DSN1
Kinetochore-associated protein DSN1

1

0

High-throughput

0.249

Low

810550

LSM1
Sm-like protein LSm1

1

0

High-throughput

0.249

Low

820238

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.249

Low

860419

EIF2A
Eukaryotic translation initiation factor 2A

1

0

High-throughput

0.249

Low

986288

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.249

Low

991364

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low

995843

SGO1
Shugoshin

1

0

High-throughput

0.249

Low

340325

KPYK1
Pyruvate kinase 1

1

0

High-throughput

0.232

Low

513240

SSB1
Ribosome-associated molecular chaperone SSB1

1

0

High-throughput

0.232

Low

540179

GFA1
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]

1

0

High-throughput

0.232

Low

641106

RL5
Large ribosomal subunit protein uL18

1

0

High-throughput

0.232

Low

754818

SSZ1
Ribosome-associated complex subunit SSZ1

1

0

High-throughput

0.232

Low

785286

MPG1
Mannose-1-phosphate guanyltransferase

1

0

High-throughput

0.232

Low

837391

IMDH3
Inosine-5'-monophosphate dehydrogenase 3

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024