Protein: CTR9
RNA polymerase-associated protein CTR9 (Centromere-binding factor 1-dependent protein 1) (Cln three-requiring protein 9)

Gene: CTR9
Organism: Saccharomyces cerevisiae S288C
Interactions: 113
UniProt ID: P89105

Gene Ontology (top 5):
GO:0000791 - euchromatin
GO:0000993 - RNA polymerase II complex binding
GO:0001015 - snoRNA transcription by RNA polymerase II
GO:0003712 - transcription coregulator activity
GO:0005634 - nucleus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

748997

PAF1
RNA polymerase II-associated protein 1

15

6

Small-scale

0.985

High

953693

CDC73
Cell division control protein 73

17

6

Small-scale

0.763

High

858836

RTF1
RNA polymerase-associated protein RTF1

15

2

Small-scale

0.762

High

750629

LEO1
RNA polymerase-associated protein LEO1

13

5

Small-scale

0.760

High

692870

SPT16
FACT complex subunit SPT16

10

0

Small-scale

0.722

High

558197

RPB3
DNA-directed RNA polymerase II subunit RPB3

5

2

Small-scale

0.704

High

550099

CSK21
Casein kinase II subunit alpha

4

8

Small-scale

0.697

High

375469

RPB1
DNA-directed RNA polymerase II subunit RPB1

3

1

Small-scale

0.667

High

953674

CTR9
RNA polymerase-associated protein CTR9

1

12

High-throughput

0.665

High

953685

POB3
FACT complex subunit POB3

5

3

Small-scale

0.648

High

650362

SPT5
Transcription elongation factor SPT5

2

1

Small-scale

0.646

High

584778

CSK22
Casein kinase II subunit alpha'

2

12

High-throughput

0.621

High

953686

HRQ1
ATP-dependent helicase HRQ1

1

6

Small-scale

0.618

High

494705

HSP72
Heat shock protein SSA2

2

10

High-throughput

0.601

High

628358

SIS1
Protein SIS1

2

6

High-throughput

0.601

High

755792

SET1
Histone-lysine N-methyltransferase, H3 lysine-4 specific

2

20

Small-scale

0.584

High

633479

MAS5
Mitochondrial protein import protein MAS5

2

7

High-throughput

0.571

High

757954

CSK2C
Casein kinase II subunit beta'

2

3

High-throughput

0.567

High

798373

CSK2B
Casein kinase II subunit beta

2

3

High-throughput

0.567

High

953677

MCE1
mRNA-capping enzyme subunit alpha

2

0

High-throughput

0.563

High

544245

HSC82
ATP-dependent molecular chaperone HSC82

1

7

High-throughput

0.553

High

953683

DHR1
Probable ATP-dependent RNA helicase DHR1

1

4

High-throughput

0.553

High

512352

SSB1
Ribosome-associated molecular chaperone SSB1

2

10

High-throughput

0.552

High

774658

LYS12
Homoisocitrate dehydrogenase, mitochondrial

2

1

High-throughput

0.537

High

812606

IML1
Vacuolar membrane-associated protein IML1

2

1

High-throughput

0.537

High

953676

SLT2
Mitogen-activated protein kinase SLT2/MPK1

1

1

Small-scale

0.529

High

703945

PRS7
26S proteasome regulatory subunit 7 homolog

1

5

Small-scale

0.515

High

567596

PHO81
Phosphate system positive regulatory protein PHO81

1

2

High-throughput

0.508

High

641138

DAL80
Nitrogen regulatory protein DAL80

1

9

High-throughput

0.508

High

410233

UBC2
Ubiquitin-conjugating enzyme E2 2

1

3

Small-scale

0.501

High

697422

CHD1
Chromo domain-containing protein 1

1

10

Small-scale

0.501

High

901992

H3
Histone H3

1

9

Small-scale

0.501

High

561898

TUP1
General transcriptional corepressor TUP1

1

14

High-throughput

0.481

High

805222

TAF1
Transcription initiation factor TFIID subunit 1

1

1

High-throughput

0.481

High

812644

HMS2
Probable transcription factor HMS2

1

3

High-throughput

0.481

High

953700

SMT3
Ubiquitin-like protein SMT3

1

4

High-throughput

0.481

High

407245

RS3
Small ribosomal subunit protein uS3

1

2

High-throughput

0.479

High

408434

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

2

High-throughput

0.479

High

604823

PSB4
Proteasome subunit beta type-4

1

1

Small-scale

0.479

High

606717

RPC2
DNA-directed RNA polymerase III subunit RPC2

1

2

High-throughput

0.479

High

663032

TF2B
Transcription initiation factor IIB

1

2

High-throughput

0.479

High

664995

BMH1
Protein BMH1

1

4

High-throughput

0.479

High

680926

HS104
Heat shock protein 104

1

2

High-throughput

0.479

High

688372

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

1

High-throughput

0.479

High

730883

CENPA
Histone H3-like centromeric protein CSE4

1

9

High-throughput

0.479

High

744161

ATR
Serine/threonine-protein kinase MEC1

1

1

Small-scale

0.479

High

772484

RAD26
DNA repair and recombination protein RAD26

1

12

Small-scale

0.479

High

774489

MOB1
DBF2 kinase activator protein MOB1

1

2

High-throughput

0.479

High

819902

CLA4
Serine/threonine-protein kinase CLA4

1

7

Small-scale

0.479

High

859262

INO80
Chromatin-remodeling ATPase INO80

1

12

Small-scale

0.479

High

953678

NOP3
Serine/arginine

1

8

Small-scale

0.479

High

953682

RUVB1
RuvB-like protein 1

1

5

High-throughput

0.479

High

953698

YL11B
Transposon Ty1-LR1 Gag-Pol polyprotein

1

1

High-throughput

0.479

High

859215

PEX14
Peroxisomal membrane protein PEX14

1

1

High-throughput

0.464

High

953690

HDA2
HDA1 complex subunit 2

1

0

High-throughput

0.460

High

756620

ELP5
Elongator complex protein 5

1

0

High-throughput

0.458

High

812576

CENPK
Inner kinetochore subunit MCM22

1

0

High-throughput

0.458

High

865459

ELOA1
Elongin-A

1

0

Small-scale

0.458

High

953687

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.458

High

953688

MMS1
E3 ubiquitin-protein ligase linker protein MMS1

1

0

Small-scale

0.458

High

953689

TFC6
Transcription factor tau 91 kDa subunit

1

0

High-throughput

0.458

High

953691

CFT1
Protein CFT1

1

0

Small-scale

0.458

High

953697

TAF10
Transcription initiation factor TFIID subunit 10

1

0

High-throughput

0.458

High

953699

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

743637

HMT1
Protein arginine N-methyltransferase 1

1

5

High-throughput

0.457

High

492126

HSP71
Heat shock protein SSA1

1

10

High-throughput

0.445

High

695300

HSP7F
Heat shock protein homolog SSE1

1

14

High-throughput

0.445

High

769177

SSB2
Ribosome-associated molecular chaperone SSB2

1

10

High-throughput

0.445

High

829665

RL4B
Large ribosomal subunit protein uL4B

1

3

High-throughput

0.445

High

866404

APJ1
J domain-containing protein APJ1

1

7

High-throughput

0.445

High

634965

STP22
Suppressor protein STP22 of temperature-sensitive alpha-factor receptor and arginine permease

1

1

High-throughput

0.439

High

383295

RL25
Large ribosomal subunit protein uL23

1

2

High-throughput

0.437

High

405773

RL26A
Large ribosomal subunit protein uL24A

1

1

High-throughput

0.437

High

408060

RS13
Small ribosomal subunit protein uS15

1

2

High-throughput

0.437

High

410163

EIF3B
Eukaryotic translation initiation factor 3 subunit B

1

1

High-throughput

0.437

High

471198

RS22A
Small ribosomal subunit protein uS8A

1

1

High-throughput

0.437

High

472342

RL31A
Large ribosomal subunit protein eL31A

1

1

High-throughput

0.437

High

634729

KRR1
KRR1 small subunit processome component

1

1

High-throughput

0.437

High

701035

SMY2
Protein SMY2

1

1

High-throughput

0.437

High

706428

RS3A1
Small ribosomal subunit protein eS1A

1

3

High-throughput

0.437

High

762463

LAA1
AP-1 accessory protein LAA1

1

1

High-throughput

0.437

High

953679

RS15
Small ribosomal subunit protein uS19

1

2

High-throughput

0.437

High

953680

RL6A
Large ribosomal subunit protein eL6A

1

2

High-throughput

0.437

High

953694

VAM6
Vacuolar morphogenesis protein 6

1

1

High-throughput

0.437

High

953696

RS10A
Small ribosomal subunit protein eS10A

1

1

High-throughput

0.437

High

612263

HSP12
12 kDa heat shock protein

1

0

High-throughput

0.426

High

953675

SEN1
Helicase SEN1

1

0

Small-scale

0.426

High

399593

RLA0
Large ribosomal subunit protein uL10

1

2

High-throughput

0.407

High

424662

PYR1
Multifunctional protein URA2

1

1

High-throughput

0.407

High

667256

RL8B
Large ribosomal subunit protein eL8B

1

1

High-throughput

0.407

High

715838

MDJ1
DnaJ homolog 1, mitochondrial

1

7

High-throughput

0.407

High

760928

TCPD
T-complex protein 1 subunit delta

1

6

High-throughput

0.407

High

766536

PFD2
Prefoldin subunit 2

1

1

High-throughput

0.407

High

811426

TCPQ
T-complex protein 1 subunit theta

1

6

High-throughput

0.407

High

837329

IMDH3
Inosine-5'-monophosphate dehydrogenase 3

1

3

High-throughput

0.407

High

872863

ZDS2
Protein ZDS2

1

1

High-throughput

0.407

High

953681

NU116
Nucleoporin NUP116/NSP116

1

2

Small-scale

0.407

High

953692

SWA2
Auxilin-like clathrin uncoating factor SWA2

1

7

High-throughput

0.407

High

585359

MYO2
Myosin-2

2

0

High-throughput

0.307

High

730063

RS27A
Small ribosomal subunit protein eS27A

2

0

High-throughput

0.305

High

541567

AMPL
Vacuolar aminopeptidase 1

1

0

High-throughput

0.265

Low

629757

STE50
Protein STE50

1

0

High-throughput

0.251

Low

746763

FL2D
Protein MUM2

1

0

High-throughput

0.251

Low

805283

STB2
Protein STB2

1

0

High-throughput

0.251

Low

336155

COX6
Cytochrome c oxidase subunit 6, mitochondrial

1

0

High-throughput

0.249

Low

524414

CAF20
Cap-associated protein CAF20

1

0

High-throughput

0.249

Low

792541

UTP10
U3 small nucleolar RNA-associated protein 10

1

0

High-throughput

0.249

Low

953695

CRT10
Protein CRT10

1

0

Small-scale

0.249

Low

785161

MPG1
Mannose-1-phosphate guanyltransferase

1

0

High-throughput

0.232

Low

810104

PFD1
Prefoldin subunit 1

1

0

High-throughput

0.232

Low

953684

HSP31
Glutathione-independent glyoxalase HSP31

1

0

High-throughput

0.232

Low

953701

HSP42
Heat shock protein 42

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024