Protein: UTP13
U3 small nucleolar RNA-associated protein 13 (U3 snoRNA-associated protein 13) (U three protein 13)

Gene: UTP13
Organism: Saccharomyces cerevisiae S288C
Interactions: 145
UniProt ID: Q05946

Gene Ontology (top 5):
GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005654 - nucleoplasm

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

635644

PWP2
Periodic tryptophan protein 2

13

17

Small-scale

0.981

High

985442

UTP12
U3 small nucleolar RNA-associated protein 12

9

18

Small-scale

0.976

High

772676

UTP18
U3 small nucleolar RNA-associated protein 18

7

1

High-throughput

0.965

High

985415

UTP21
U3 small nucleolar RNA-associated protein 21

6

18

Small-scale

0.940

High

767418

UTP7
U3 small nucleolar RNA-associated protein 7

4

19

High-throughput

0.900

High

985421

RRP9
Ribosomal RNA-processing protein 9

3

17

High-throughput

0.861

High

810919

MTR4
ATP-dependent RNA helicase DOB1

2

20

Small-scale

0.754

High

985425

UTP4
U3 small nucleolar RNA-associated protein 4

2

18

Small-scale

0.754

High

970466

UTP6
U3 small nucleolar RNA-associated protein 6

7

4

Small-scale

0.751

High

985422

NOC4
Nucleolar complex protein 4

7

8

Small-scale

0.743

High

792581

UTP10
U3 small nucleolar RNA-associated protein 10

5

5

High-throughput

0.714

High

979022

DHR1
Probable ATP-dependent RNA helicase DHR1

4

13

Small-scale

0.676

High

985446

NOP58
Nucleolar protein 58

4

13

Small-scale

0.676

High

748703

ENP1
Essential nuclear protein 1

4

3

Small-scale

0.672

High

985433

UTP16
U3 small nucleolar RNA-associated protein 16

3

1

High-throughput

0.667

High

985414

UTP13
U3 small nucleolar RNA-associated protein 13

1

17

High-throughput

0.665

High

634771

KRR1
KRR1 small subunit processome component

3

2

High-throughput

0.656

High

866614

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

3

3

High-throughput

0.656

High

985450

NOP14
Nucleolar complex protein 14

3

3

High-throughput

0.656

High

865420

CSL4
Exosome complex component CSL4

3

2

Small-scale

0.640

High

707137

DCA13
Protein SOF1

1

19

High-throughput

0.618

High

865617

UBP10
Ubiquitin carboxyl-terminal hydrolase 10

1

20

High-throughput

0.618

High

973671

UTP17
NET1-associated nuclear protein 1

1

20

High-throughput

0.618

High

978630

UTP5
U3 small nucleolar RNA-associated protein 5

1

18

High-throughput

0.618

High

979237

UTP15
U3 small nucleolar RNA-associated protein 15

1

19

High-throughput

0.618

High

860740

UTP22
U3 small nucleolar RNA-associated protein 22

2

3

High-throughput

0.614

High

775389

FAF1
Protein FAF1

2

1

Small-scale

0.611

High

811557

MPP10
U3 small nucleolar RNA-associated protein MPP10

2

7

Small-scale

0.611

High

492457

HSP71
Heat shock protein SSA1

4

13

High-throughput

0.608

High

864732

ESF2
Pre-rRNA-processing protein ESF2

2

2

High-throughput

0.601

High

630538

RRP7
Ribosomal RNA-processing protein 7

2

2

High-throughput

0.584

High

715983

UTP20
U3 small nucleolar RNA-associated protein 20

2

2

High-throughput

0.584

High

861026

UTP8
U3 small nucleolar RNA-associated protein 8

2

2

Small-scale

0.584

High

866053

NAT10
RNA cytidine acetyltransferase

2

4

High-throughput

0.584

High

975830

TOM1
E3 ubiquitin-protein ligase TOM1

2

9

High-throughput

0.584

High

979713

UTP14
U3 small nucleolar RNA-associated protein 14

2

11

High-throughput

0.584

High

982871

RRP5
rRNA biogenesis protein RRP5

2

16

High-throughput

0.584

High

985436

BMS1
Ribosome biogenesis protein BMS1

2

10

High-throughput

0.584

High

985440

RRP6
Exosome complex exonuclease RRP6

2

7

High-throughput

0.584

High

979768

ARP10
Actin-like protein ARP10

1

0

High-throughput

0.578

High

820176

RS12
Small ribosomal subunit protein eS12

1

3

High-throughput

0.553

High

860377

EIF2A
Eukaryotic translation initiation factor 2A

1

4

High-throughput

0.553

High

985416

MRD1
Multiple RNA-binding domain-containing protein 1

1

9

Small-scale

0.536

High

628479

SIS1
Protein SIS1

2

11

High-throughput

0.521

High

861445

NOP19
Nucleolar protein 19

1

0

High-throughput

0.518

High

746784

FL2D
Protein MUM2

1

0

High-throughput

0.513

High

389986

VDAC1
Mitochondrial outer membrane protein porin 1

1

4

High-throughput

0.489

High

392204

H2A1
Histone H2A.1

1

11

High-throughput

0.489

High

512757

SSB1
Ribosome-associated molecular chaperone SSB1

1

15

High-throughput

0.489

High

566663

VATA
V-type proton ATPase catalytic subunit A

1

13

High-throughput

0.489

High

568349

CAP
Adenylyl cyclase-associated protein

1

1

High-throughput

0.489

High

752976

YHI0
Putative proline--tRNA ligase YHR020W

1

5

High-throughput

0.489

High

797800

ATG18
Autophagy-related protein 18

1

17

High-throughput

0.489

High

798003

SA155
SIT4-associating protein SAP155

1

1

High-throughput

0.489

High

985426

PRP11
Pre-mRNA-splicing factor PRP11

1

1

High-throughput

0.489

High

480321

RS6A
Small ribosomal subunit protein eS6A

1

6

High-throughput

0.479

High

549498

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

9

High-throughput

0.479

High

593702

DBP4
ATP-dependent RNA helicase HCA4

1

20

High-throughput

0.479

High

606761

RPC2
DNA-directed RNA polymerase III subunit RPC2

1

5

High-throughput

0.479

High

630258

RRP43
Exosome complex component RRP43

1

1

High-throughput

0.479

High

688425

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

1

High-throughput

0.479

High

700098

IMP3
U3 small nucleolar ribonucleoprotein protein IMP3

1

7

High-throughput

0.479

High

711072

UTP11
U3 small nucleolar RNA-associated protein 11

1

1

High-throughput

0.479

High

733601

RL1D1
Ribosome biogenesis protein UTP30

1

9

High-throughput

0.479

High

753180

DBP8
ATP-dependent RNA helicase DBP8

1

20

High-throughput

0.479

High

754996

RRP4
Exosome complex component RRP4

1

4

High-throughput

0.479

High

755201

LRP1
Exosome complex protein LRP1

1

1

High-throughput

0.479

High

756786

UTP9
U3 small nucleolar RNA-associated protein 9

1

1

High-throughput

0.479

High

758469

RRP8
25S rRNA

1

3

High-throughput

0.479

High

768112

LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

1

2

High-throughput

0.479

High

774280

RRT14
Regulator of rDNA transcription protein 14

1

1

High-throughput

0.479

High

774748

UTP25
U3 small nucleolar RNA-associated protein 25

1

1

High-throughput

0.479

High

799855

ROK1
ATP-dependent RNA helicase ROK1

1

16

High-throughput

0.479

High

809588

RRP41
Exosome complex component SKI6

1

11

High-throughput

0.479

High

811351

NOP9
Nucleolar protein 9

1

2

Small-scale

0.479

High

816905

NOL10
Ribosome biogenesis protein ENP2

1

4

High-throughput

0.479

High

816973

MTR3
Exosome complex component MTR3

1

1

High-throughput

0.479

High

819881

TRF5
Poly(A) RNA polymerase protein 1

1

4

Small-scale

0.479

High

860809

RRP46
Exosome complex component RRP46

1

11

High-throughput

0.479

High

861604

PXR1
Protein PXR1

1

2

Small-scale

0.479

High

976856

HAS1
ATP-dependent RNA helicase HAS1

1

20

High-throughput

0.479

High

979407

BUD22
Bud site selection protein 22

1

1

High-throughput

0.479

High

983767

FCF1
rRNA-processing protein FCF1

1

2

High-throughput

0.479

High

984308

RRP45
Exosome complex component RRP45

1

8

High-throughput

0.479

High

985417

SGD1
Suppressor of glycerol defect protein 1

1

8

High-throughput

0.479

High

985418

NEP1
Ribosomal RNA small subunit methyltransferase NEP1

1

2

High-throughput

0.479

High

985420

ESF1
Pre-rRNA-processing protein ESF1

1

2

High-throughput

0.479

High

985423

BFR2
Protein BFR2

1

4

High-throughput

0.479

High

985428

CMS1
Protein CMS1

1

1

High-throughput

0.479

High

985429

RCL1
RNA 3'-terminal phosphate cyclase-like protein

1

2

High-throughput

0.479

High

985430

RRP44
Exosome complex exonuclease DIS3

1

4

High-throughput

0.479

High

985431

RRP40
Exosome complex component RRP40

1

2

High-throughput

0.479

High

985437

FCF2
rRNA-processing protein FCF2

1

2

High-throughput

0.479

High

985439

SAS10
Something about silencing protein 10

1

2

High-throughput

0.479

High

985441

MAK21
Ribosome biogenesis protein MAK21

1

8

High-throughput

0.479

High

985443

RRP42
Exosome complex component RRP42

1

8

High-throughput

0.479

High

985444

NOP56
Nucleolar protein 56

1

13

High-throughput

0.479

High

985445

RRP36
rRNA biogenesis protein RRP36

1

1

High-throughput

0.479

High

985447

RRP12
Ribosomal RNA-processing protein 12

1

4

High-throughput

0.479

High

985448

EFG1P
rRNA-processing protein EFG1

1

2

High-throughput

0.479

High

985451

PNO1
Pre-rRNA-processing protein PNO1

1

2

High-throughput

0.479

High

985438

KAD6
Adenylate kinase isoenzyme 6 homolog FAP7

1

1

High-throughput

0.457

High

342114

ATPB
ATP synthase subunit beta, mitochondrial

1

11

High-throughput

0.457

High

381489

GAL1
Galactokinase

1

1

High-throughput

0.457

High

423913

ATPA
ATP synthase subunit alpha, mitochondrial

1

11

High-throughput

0.457

High

521059

G6PI
Glucose-6-phosphate isomerase

1

1

High-throughput

0.457

High

556304

VATB
V-type proton ATPase subunit B

1

11

High-throughput

0.457

High

581320

ODO2
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial

1

5

High-throughput

0.457

High

588228

HSP60
Heat shock protein 60, mitochondrial

1

20

High-throughput

0.457

High

811463

TCPQ
T-complex protein 1 subunit theta

1

20

High-throughput

0.457

High

733937

RPF2
Ribosome biogenesis protein RPF2

1

3

High-throughput

0.445

High

471260

RS22A
Small ribosomal subunit protein uS8A

1

6

High-throughput

0.437

High

663343

TF2B
Transcription initiation factor IIB

1

4

High-throughput

0.437

High

665054

BMH1
Protein BMH1

1

7

High-throughput

0.437

High

701089

SMY2
Protein SMY2

1

3

High-throughput

0.437

High

762567

LAA1
AP-1 accessory protein LAA1

1

3

High-throughput

0.437

High

775864

DSN1
Kinetochore-associated protein DSN1

1

1

High-throughput

0.437

High

866476

APJ1
J domain-containing protein APJ1

1

12

High-throughput

0.437

High

959874

NUM1
Nuclear migration protein NUM1

1

15

High-throughput

0.437

High

985427

VAM6
Vacuolar morphogenesis protein 6

1

1

High-throughput

0.437

High

985432

SGO1
Shugoshin

1

2

High-throughput

0.437

High

985434

RS10A
Small ribosomal subunit protein eS10A

1

8

High-throughput

0.437

High

985435

NCBP2
Nuclear cap-binding protein subunit 2

1

9

High-throughput

0.437

High

985449

RS22B
Small ribosomal subunit protein uS8B

1

6

High-throughput

0.437

High

366904

HSP82
ATP-dependent molecular chaperone HSP82

1

18

High-throughput

0.407

High

494980

HSP72
Heat shock protein SSA2

1

13

High-throughput

0.407

High

541793

SEC63
Protein translocation protein SEC63

1

10

High-throughput

0.407

High

544430

HSC82
ATP-dependent molecular chaperone HSC82

1

18

High-throughput

0.407

High

633579

MAS5
Mitochondrial protein import protein MAS5

1

12

High-throughput

0.407

High

695537

HSP7F
Heat shock protein homolog SSE1

1

15

High-throughput

0.407

High

705663

HSP78
Heat shock protein 78, mitochondrial

1

2

High-throughput

0.407

High

761081

TCPZ
T-complex protein 1 subunit zeta

1

20

High-throughput

0.407

High

769495

SSB2
Ribosome-associated molecular chaperone SSB2

1

15

High-throughput

0.407

High

792415

TCPH
T-complex protein 1 subunit eta

1

20

High-throughput

0.407

High

817294

HLJ1
Protein HLJ1

1

6

High-throughput

0.407

High

985424

SWA2
Auxilin-like clathrin uncoating factor SWA2

1

10

High-throughput

0.407

High

689156

COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial

1

0

High-throughput

0.282

High

739500

PGM2
Phosphoglucomutase 2

1

0

High-throughput

0.279

Low

778770

FET4
Low-affinity Fe(2+) transport protein

1

0

High-throughput

0.279

Low

862329

DIP5
Dicarboxylic amino acid permease

1

0

High-throughput

0.279

Low

809636

YPP1
Cargo-transport protein YPP1

1

0

High-throughput

0.269

Low

810470

MRX5
MIOREX complex component 5

1

0

High-throughput

0.269

Low

864437

MPP6
M-phase phosphoprotein 6 homolog

1

0

High-throughput

0.249

Low

985419

TFC6
Transcription factor tau 91 kDa subunit

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024