Protein: YSH1
Endoribonuclease YSH1 (EC 3.1.27.-) (Yeast 73 kDa homolog 1) (mRNA 3'-end-processing protein YSH1)

Gene: YSH1
Organism: Saccharomyces cerevisiae S288C
Interactions: 44
UniProt ID: Q06224

Gene Ontology (top 5):
GO:0003723 - RNA binding
GO:0004521 - RNA endonuclease activity
GO:0004534 - 5'-3' RNA exonuclease activity
GO:0005634 - nucleus
GO:0005847 - mRNA cleavage and polyadenylation specificity factor complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

728168

MPE1
Protein MPE1

10

3

Small-scale

0.977

High

986641

CFT2
Cleavage factor two protein 2

6

14

Small-scale

0.949

High

964626

PTA1
Pre-tRNA-processing protein PTA1

12

8

Small-scale

0.757

High

791183

PFS2
Polyadenylation factor subunit 2

7

11

Small-scale

0.750

High

800690

FIP1
Pre-mRNA polyadenylation factor FIP1

8

4

Small-scale

0.747

High

985883

YTH1
mRNA 3'-end-processing protein YTH1

6

9

Small-scale

0.736

High

696409

PP12
Serine/threonine-protein phosphatase PP1-2

6

6

Small-scale

0.733

High

785599

REF2
RNA end formation protein 2

6

2

Small-scale

0.732

High

667538

PAP
Poly(A) polymerase

6

8

Small-scale

0.732

High

732688

SWD2
COMPASS component SWD2

6

8

Small-scale

0.732

High

986638

CFT1
Protein CFT1

5

8

Small-scale

0.714

High

761150

PCF11
Protein PCF11

5

3

Small-scale

0.712

High

862605

SSU72
RNA polymerase II subunit A C-terminal domain phosphatase SSU72

5

5

Small-scale

0.709

High

986640

CLP1
mRNA cleavage and polyadenylation factor CLP1

3

3

Small-scale

0.680

High

764817

PTI1
Protein PTI1

3

2

Small-scale

0.650

High

593705

DBP4
ATP-dependent RNA helicase HCA4

2

3

High-throughput

0.621

High

628770

RNA14
mRNA 3'-end-processing protein RNA14

2

3

High-throughput

0.621

High

704833

TFC4
Transcription factor tau 131 kDa subunit

2

1

Small-scale

0.595

High

366924

HSP82
ATP-dependent molecular chaperone HSP82

2

2

High-throughput

0.571

High

492500

HSP71
Heat shock protein SSA1

2

7

High-throughput

0.552

High

512805

SSB1
Ribosome-associated molecular chaperone SSB1

2

5

High-throughput

0.552

High

975970

GCN5
Histone acetyltransferase GCN5

1

8

High-throughput

0.536

High

614813

KC11
Casein kinase I homolog 1

1

1

Small-scale

0.501

High

812636

YJ9I
Uncharacterized protein YJR141W

1

0

Small-scale

0.480

High

558266

RPB3
DNA-directed RNA polymerase II subunit RPB3

1

1

High-throughput

0.479

High

613875

TAF2
Transcription initiation factor TFIID subunit 2

1

1

High-throughput

0.479

High

628796

RNA15
mRNA 3'-end-processing protein RNA15

1

11

Small-scale

0.479

High

663372

TF2B
Transcription initiation factor IIB

1

2

High-throughput

0.479

High

694252

PUB1
Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1

1

3

High-throughput

0.479

High

805130

SAC3
Nuclear mRNA export protein SAC3

1

1

High-throughput

0.479

High

978296

SCC2
Sister chromatid cohesion protein 2

1

1

High-throughput

0.479

High

986642

SCC1
Sister chromatid cohesion protein 1

1

1

High-throughput

0.479

High

986643

SMT3
Ubiquitin-like protein SMT3

1

2

High-throughput

0.479

High

986637

CORO
Coronin-like protein

1

3

High-throughput

0.470

High

376934

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

1

1

High-throughput

0.445

High

695569

HSP7F
Heat shock protein homolog SSE1

1

11

High-throughput

0.445

High

969197

UBC7
Ubiquitin-conjugating enzyme E2 7

1

3

High-throughput

0.417

High

556310

VATB
V-type proton ATPase subunit B

1

1

High-throughput

0.407

High

986639

SWA2
Auxilin-like clathrin uncoating factor SWA2

1

1

High-throughput

0.407

High

770030

YNU8
Uncharacterized protein YNL208W

1

0

High-throughput

0.269

Low

701096

SMY2
Protein SMY2

1

0

High-throughput

0.249

Low

773761

6P21
6-phosphofructo-2-kinase 1

1

0

High-throughput

0.232

Low

775669

DJP1
DnaJ-like protein 1

1

0

High-throughput

0.232

Low

810161

PFD1
Prefoldin subunit 1

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024