HitPredict

Interactor 1: SRC28 (Q1PDV2)
Serine/arginine-rich SC35-like splicing factor SCL28 (At-SCL28) (AtSCL28) (28 kDa SC35-like splicing factor) (SC35-like splicing factor 28) (Serine/arginine-rich splicing factor 28)
Gene: SCL28

Interactor 2: RSZ33 (Q8VYA5)
Serine/arginine-rich splicing factor RS2Z33 (RS-containing zinc finger protein 33) (At-RS2Z33) (At-RSZ33) (AtRSZ33)
Gene: RS2Z33

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.46	1.00	0.680

Property	Details
Experiments	12176998
Identification Methods	two hybrid, pull down
Interaction Type	direct interaction

Property	Details
Interacting Pfam domains	RRM_1~RRM_1
Common GO terms	GO:0000398 - mRNA splicing, via spliceosome GO:0005681 - spliceosomal complex GO:0016607 - nuclear speck
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 236 At			1 290
+	At
		1257937 SL30A_ARATH (7-227): 5.18e-42: 145: 37.76		RSZ33_ARATH (1-290): 1.32e-32: 123: 100.00
+	At
		1163067 SL30A_ARATH (7-227): 5.18e-42: 145: 37.76		CYP59_ARATH (1-270): 1.3e-28: 116: 21.35
+	At
		1338059 SL30A_ARATH (7-227): 5.18e-42: 145: 37.76		SR30_ARATH (10-90): 1.04e-26: 107: 47.67
+	Hs
		853911 NCBP2_HUMAN (25-157): 1.78e-32: 117: 19.55		SRSF7_HUMAN (1-114): 5.38e-36: 130: 47.06
+	Zm
		30171 A0A1D6K4S7_MAIZE (34-133): 4.77e-36: 133: 32.00		A0A1D6M1U3_MAIZE (6-128): 2.76e-27: 110: 31.34
+	At
		1093112 SRC28_ARATH (23-221): 2.77e-34: 124: 100.00		CYP59_ARATH (1-270): 1.3e-28: 116: 21.35
+	At
		1257938 SRC33_ARATH (7-203): 2.2e-30: 115: 37.79		RSZ33_ARATH (1-290): 1.32e-32: 123: 100.00
+	At
		186869 SL30A_ARATH (7-227): 5.18e-42: 145: 37.76		SR34_ARATH (8-88): 6.25e-21: 92.2: 47.67
+	Hs
		853975 NCBP2_HUMAN (25-157): 1.78e-32: 117: 19.55		RBM4_HUMAN (5-281): 8.2e-30: 117: 18.12
+	At
		1093121 SRC28_ARATH (23-221): 2.77e-34: 124: 100.00		SR30_ARATH (10-90): 1.04e-26: 107: 47.67
+	At
		1163068 SRC33_ARATH (7-203): 2.2e-30: 115: 37.79		CYP59_ARATH (1-270): 1.3e-28: 116: 21.35
+	Hs
		853877 NCBP2_HUMAN (25-157): 1.78e-32: 117: 19.55		SRSF9_HUMAN (9-100): 7.93e-25: 101: 38.14
+	Hs
		432618 NCBP2_HUMAN (25-157): 1.78e-32: 117: 19.55		HNRPC_HUMAN (3-269): 3.99e-24: 100: 15.24
+	At
		186861 SRC28_ARATH (23-221): 2.77e-34: 124: 100.00		SR34_ARATH (8-88): 6.25e-21: 92.2: 47.67
+	Hs
		853878 NCBP2_HUMAN (25-157): 1.78e-32: 117: 19.55		SRSF6_HUMAN (12-84): 3.3e-23: 99.1: 52.06
+	Hs
		992863 SRS12_HUMAN (47-236): 1.66e-29: 112: 31.58		SRSF1_HUMAN (9-79): 1.14e-25: 103: 48.68
+	Hs
		853881 NCBP2_HUMAN (25-157): 1.78e-32: 117: 19.55		PABP4_HUMAN (1-183): 2.19e-18: 86.8: 18.23
+	Hs
		516425 NCBP2_HUMAN (25-157): 1.78e-32: 117: 19.55		PABP1_HUMAN (1-193): 6.21e-17: 82.6: 16.34
+	Hs
		993783 SRS12_HUMAN (47-236): 1.66e-29: 112: 31.58		SRSF4_HUMAN (12-84): 2.11e-11: 65.9: 53.43
+	Hs
		952060 SRS12_HUMAN (47-236): 1.66e-29: 112: 31.58		SRSF3_HUMAN (10-99): 2.28e-10: 60.1: 45.16