HitPredict

Interactor 1: CP29A (Q43349)
29 kDa ribonucleoprotein, chloroplastic (RNA-binding protein CP29A) (RNA-binding protein cp29)
Gene: CP29A

Interactor 2: CSP3 (Q94C69)
Cold shock domain-containing protein 3 (AtCSP3)
Gene: CSP3

Species: Arabidopsis thaliana

Source: biogrid

Category: Small-scale

Confidence: High

Method score	Annotation score	Interaction score
0.38	1.00	0.621

Property	Details
Experiments	23334891
Identification Methods	two hybrid
Interaction Type	direct interaction

Property	Details
Interacting Pfam domains	CSD~RRM_1
Common GO terms	GO:0003729 - mRNA binding GO:0009631 - cold acclimation
Homologous interactions	20

Homologous interactions (Top 20)

Color coding for hit scores

	1 342 At			1 301
+	At
		1277788 CP29B_ARATH (11-342): 3.63e-64: 206: 66.27		CSP3_ARATH (1-301): 9.78e-75: 232: 100.00
+	Hs
		1020278 ELAV2_HUMAN (86-174): 3.78e-23: 100: 29.21		LN28B_HUMAN (2-181): 1.44e-34: 127: 28.72
+	Hs
		1020331 ELAV2_HUMAN (86-174): 3.78e-23: 100: 29.21		LN28A_HUMAN (2-159): 2.99e-30: 114: 26.01
+	Hs
		1031465 PABP4_HUMAN (247-341): 2.92e-22: 99.8: 25.26		LN28A_HUMAN (2-159): 2.99e-30: 114: 26.01
+	Hs
		516697 PABP1_HUMAN (247-341): 3.49e-22: 99.4: 23.16		LN28A_HUMAN (2-159): 2.99e-30: 114: 26.01
+	Hs
		474028 PAB4L_HUMAN (248-335): 5.61e-18: 85.6: 26.14		LN28B_HUMAN (2-181): 1.44e-34: 127: 28.72
+	Hs
		1055882 ELAV3_HUMAN (68-174): 3.41e-22: 97.9: 23.36		LN28A_HUMAN (2-159): 2.99e-30: 114: 26.01
+	Mm
		665764 PABP1_MOUSE (247-341): 3.49e-22: 99.4: 23.16		LN28A_MOUSE (5-160): 4.24e-29: 112: 25.73
+	Hs
		516350 PABP1_HUMAN (247-341): 3.49e-22: 99.4: 23.16		YBOX3_HUMAN (2-90): 2.3e-27: 111: 31.18
+	Mm
		1225251 Q99LF8_MOUSE (247-341): 7.92e-22: 98.3: 25.26		LN28A_MOUSE (5-160): 4.24e-29: 112: 25.73
+	Hs
		1020355 ELAV2_HUMAN (86-174): 3.78e-23: 100: 29.21		YBOX2_HUMAN (2-95): 2.84e-26: 108: 32.65
+	Hs
		931122 ELAV2_HUMAN (86-174): 3.78e-23: 100: 29.21		YBOX1_HUMAN (3-90): 2.21e-25: 104: 31.52
+	Hs
		931135 PABP4_HUMAN (247-341): 2.92e-22: 99.8: 25.26		YBOX1_HUMAN (3-90): 2.21e-25: 104: 31.52
+	Hs
		516455 PABP1_HUMAN (247-341): 3.49e-22: 99.4: 23.16		YBOX1_HUMAN (3-90): 2.21e-25: 104: 31.52
+	Mm
		923889 ELAV1_MOUSE (93-174): 1.91e-20: 92.1: 34.15		YBOX1_MOUSE (3-90): 2.21e-25: 104: 31.52
+	Hs
		931176 ELAV1_HUMAN (93-174): 3.09e-20: 91.7: 34.15		YBOX1_HUMAN (3-90): 2.21e-25: 104: 31.52
+	Hs
		931406 PABP3_HUMAN (247-341): 1.12e-19: 91.7: 20.00		YBOX1_HUMAN (3-90): 2.21e-25: 104: 31.52
+	Hs
		474013 PAB4L_HUMAN (248-335): 5.61e-18: 85.6: 26.14		YBOX1_HUMAN (3-90): 2.21e-25: 104: 31.52
+	Hs
		914823 PABP3_HUMAN (247-341): 1.12e-19: 91.7: 20.00		CNBP_HUMAN (60-212): 5.77e-10: 59.1: 24.22
+	Sc
		376882 PABP_YEAST (100-186): 1.15e-17: 85.9: 32.18		GIS2_YEAST (196-300): 3.48e-11: 62.2: 30.48