HitPredict

Interactor 1: Q8LAK5 (Q8LAK5)
Small nuclear ribonucleoprotein E (snRNP-E) (Sm protein E)
Gene: PCP-LIKE

Interactor 2: LSM7 (Q9SI54)
Sm-like protein LSM7 (AtLSM7) (Protein EMBRYO DEFECTIVE 2816) (U6 snRNA-associated Sm-like protein LSM7)
Gene: LSM7

Species: Arabidopsis thaliana

Source: intact

Category: High-throughput

Confidence: High

Method score	Annotation score	Interaction score
0.48	1.00	0.698

Property	Details
Experiments	21798944
Identification Methods	two hybrid, two hybrid array
Interaction Type	direct interaction, physical association

Property	Details
Interacting Pfam domains	LSM~LSM
Common GO terms	GO:0003723 - RNA binding
Homologous interactions	13

Homologous interactions

Color coding for hit scores

	1 88 At			1 99
+	At
		1352284 Q9ZV45_ARATH (1-88): 4e-45: 141: 97.73		LSM7_ARATH (1-99): 4.92e-36: 119: 100.00
+	Hs
		911766 RUXE_HUMAN (5-85): 2.45e-42: 134: 69.14		LSM7_HUMAN (4-97): 2.18e-32: 110: 55.32
+	Dm
		1368676 RUXE_DROME (5-85): 1.43e-41: 132: 67.90		Q9VJI7_DROME (4-96): 2.15e-28: 100: 58.51
+	Hs
		911614 RUXE_HUMAN (5-85): 2.45e-42: 134: 69.14		RSMN_HUMAN (3-92): 1.39e-23: 91.8: 23.91
+	Hs
		538889 RUXE_HUMAN (5-85): 2.45e-42: 134: 69.14		RSMB_HUMAN (3-92): 3.15e-23: 90.7: 23.91
+	Hs
		911606 RUXE_HUMAN (5-85): 2.45e-42: 134: 69.14		RUXG_HUMAN (3-86): 6.14e-23: 85.7: 34.52
+	Hs
		167677 RUXE_HUMAN (5-85): 2.45e-42: 134: 69.14		LSM1_HUMAN (7-95): 1.11e-20: 81.4: 29.21
+	Hs
		68407 RUXE_HUMAN (5-85): 2.45e-42: 134: 69.14		RUXGL_HUMAN (3-86): 3.05e-21: 81.4: 33.33
+	Hs
		321385 RUXE_HUMAN (5-85): 2.45e-42: 134: 69.14		LSM8_HUMAN (11-90): 6.63e-21: 81: 33.75
+	Hs
		911607 RUXE_HUMAN (5-85): 2.45e-42: 134: 69.14		LSM3_HUMAN (2-83): 1.48e-20: 80.3: 29.55
+	Ce
		1341628 RUXE_CAEEL (1-86): 4.61e-42: 133: 59.30		RUXG_CAEEL (3-86): 1.03e-20: 79.9: 34.52
+	Sc
		884839 RUXE_YEAST (3-86): 1.53e-36: 120: 52.17		LSM3_YEAST (6-90): 6.59e-22: 83.4: 34.88
+	Sc
		770348 RUXE_YEAST (3-86): 1.53e-36: 120: 52.17		RUXG_YEAST (7-86): 1.44e-21: 82.4: 34.57